PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023002702.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 361aa MW: 40312.9 Da PI: 5.7203 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 26.5 | 1.8e-08 | 23 | 113 | 17 | 127 |
NAM 17 eyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykg 111 + L++ +g++l++ +v+ +d ++++P++Lp + ++f+ k d + +++ W+ +g d +++s ++ +g + t+ +y+g XP_023002702.1 23 RVLRRISNGDPLPE-NVLVGIDPHQFKPENLP-------DGVWFYGKCDGN-----------SDSSWRRQGGDIKLYS-DSFFTGWRATFEYYEG 97 56666677777777.67777788888888887.......345666666553...........2467************.9999************ PP NAM 112 rapkgektdWvmheyr 127 +ap+ +kt Wvm y XP_023002702.1 98 QAPHEHKTAWVMYVYW 113 ************9885 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 361 aa Download sequence |
MTPSTGTSPA TLDLFVTEKE VCRVLRRISN GDPLPENVLV GIDPHQFKPE NLPDGVWFYG 60 KCDGNSDSSW RRQGGDIKLY SDSFFTGWRA TFEYYEGQAP HEHKTAWVMY VYWTTDSGTS 120 GNSKQRETSS LCKLFIGDEQ FQSPEKIQKI ELSTIPNSES INQNHQLVVP DGSNNMENGS 180 TNQPEMREVI RSDMDYISRG DFLEILDLDT PASSSSSSEN SSRVSFTSDD CFDPMALLRD 240 IDHDNNFNSV ERDAACIRSS APIRLRTEVV HQGGSESLFD TNGSHLPGKE SPKPESVVPS 300 SGCKEPELLK GEASSSCQNK EVAKGKEAAA MDGGKKKKKK KKSISRMKKI QKKYFCFFFS 360 F |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 335 | 341 | KKKKKKK |
2 | 336 | 342 | KKKKKKK |
3 | 337 | 349 | KKKKKKSISRMKK |
4 | 338 | 350 | KKKKKKSISRMKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G65910.1 | 1e-09 | NAC family protein |