PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023002701.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 361aa MW: 40312.9 Da PI: 5.7203

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023002701.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	26.5	1.8e-08	23	113	17	127
NAM 17 eyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykg 111 + L++ +g++l++ +v+ +d ++++P++Lp + ++f+ k d + +++ W+ +g d +++s ++ +g + t+ +y+g XP_023002701.1 23 RVLRRISNGDPLPE-NVLVGIDPHQFKPENLP-------DGVWFYGKCDGN-----------SDSSWRRQGGDIKLYS-DSFFTGWRATFEYYEG 97 56666677777777.67777788888888887.......345666666553...........2467**********.9999******** PP NAM 112 rapkgektdWvmheyr 127 +ap+ +kt Wvm y XP_023002701.1 98 QAPHEHKTAWVMYVYW 113 **********9885 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MTPSTGTSPA TLDLFVTEKE VCRVLRRISN GDPLPENVLV GIDPHQFKPE NLPDGVWFYG 60 KCDGNSDSSW RRQGGDIKLY SDSFFTGWRA TFEYYEGQAP HEHKTAWVMY VYWTTDSGTS 120 GNSKQRETSS LCKLFIGDEQ FQSPEKIQKI ELSTIPNSES INQNHQLVVP DGSNNMENGS 180 TNQPEMREVI RSDMDYISRG DFLEILDLDT PASSSSSSEN SSRVSFTSDD CFDPMALLRD 240 IDHDNNFNSV ERDAACIRSS APIRLRTEVV HQGGSESLFD TNGSHLPGKE SPKPESVVPS 300 SGCKEPELLK GEASSSCQNK EVAKGKEAAA MDGGKKKKKK KKSISRMKKI QKKYFCFFFS 360 F

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MTPSTGTSPA TLDLFVTEKE VCRVLRRISN GDPLPENVLV GIDPHQFKPE NLPDGVWFYG  60
KCDGNSDSSW RRQGGDIKLY SDSFFTGWRA TFEYYEGQAP HEHKTAWVMY VYWTTDSGTS  120
GNSKQRETSS LCKLFIGDEQ FQSPEKIQKI ELSTIPNSES INQNHQLVVP DGSNNMENGS  180
TNQPEMREVI RSDMDYISRG DFLEILDLDT PASSSSSSEN SSRVSFTSDD CFDPMALLRD  240
IDHDNNFNSV ERDAACIRSS APIRLRTEVV HQGGSESLFD TNGSHLPGKE SPKPESVVPS  300
SGCKEPELLK GEASSSCQNK EVAKGKEAAA MDGGKKKKKK KKSISRMKKI QKKYFCFFFS  360
F

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	335	341	KKKKKKK
2	336	342	KKKKKKK
3	337	349	KKKKKKSISRMKK
4	338	350	KKKKKKSISRMKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-09	NAC family protein