PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023002597.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

AP2

Protein Properties

Length: 526aa MW: 57862.6 Da PI: 9.5634

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023002597.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	51.4	2.7e-16	223	282	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_023002597.1 223 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 282 78*****************988886678446***********************98 PP
2	AP2	44.9	2.9e-14	325	376	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s ++GV+++++ grW A+I + +k +lg+f t e+Aa+a++ a+ k++g XP_023002597.1 325 SVFRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEKAAEAYDIAAIKFRG 376 689*************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 526 aa Download sequence
MNNKNKIKNM NMKSMNDHNN GWLGFYGIPD SAAAGAAAMH LKSDASLCLM GPLSTSQNQG 60 MVPNSSPKLE DFLGGATMAD REHSLDLQNQ EHHHILIQNS HPYYSALVPS DPQILPIDEN 120 EIRSLRNWVS PPYYAATPHN TLEQHITGGS GGGGSASIAG MSCGELQSLS LSMSPGSEST 180 TLTAPGQISS TAAVETKKRG PGKLCHKQPL HRKSIDTFGQ RTSQYRGVTR HRWTGRYEAH 240 LWDNSCKKEG QTRKGRQVYL GGYDMEEKAA RAYDLAALKY WGPSTHINFP LENYQTELEE 300 MKNMSRQEYV AHLRRKSSGF SRGASVFRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ 360 EKAAEAYDIA AIKFRGLNAV TNFDICRYDV ERIMSSSTLL TGELARRNKK VDTTVAPNNN 420 ATNSNSTNWK TALYHNQQQQ SMAALGGNRN ASFTMALQDL IGIESLNSAS QFSNASSLVT 480 SLSSSSREGS PEKTKLATVN GVSSWYPWPA AISMAHLPVF AAWNDT

Sequence ? help Back to Top

Protein Sequence Length: 526 aa Download sequence

MNNKNKIKNM NMKSMNDHNN GWLGFYGIPD SAAAGAAAMH LKSDASLCLM GPLSTSQNQG  60
MVPNSSPKLE DFLGGATMAD REHSLDLQNQ EHHHILIQNS HPYYSALVPS DPQILPIDEN  120
EIRSLRNWVS PPYYAATPHN TLEQHITGGS GGGGSASIAG MSCGELQSLS LSMSPGSEST  180
TLTAPGQISS TAAVETKKRG PGKLCHKQPL HRKSIDTFGQ RTSQYRGVTR HRWTGRYEAH  240
LWDNSCKKEG QTRKGRQVYL GGYDMEEKAA RAYDLAALKY WGPSTHINFP LENYQTELEE  300
MKNMSRQEYV AHLRRKSSGF SRGASVFRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ  360
EKAAEAYDIA AIKFRGLNAV TNFDICRYDV ERIMSSSTLL TGELARRNKK VDTTVAPNNN  420
ATNSNSTNWK TALYHNQQQQ SMAALGGNRN ASFTMALQDL IGIESLNSAS QFSNASSLVT  480
SLSSSSREGS PEKTKLATVN GVSSWYPWPA AISMAHLPVF AAWNDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-134	AP2 family protein