PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023002504.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NAC | ||||||||
Protein Properties | Length: 254aa MW: 29036.8 Da PI: 6.9252 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 175.3 | 1.7e-54 | 15 | 140 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +kv + + +i+evd++k+ePwdLp k+k +ekewyfF+ rd+ky++g r+nratk+gyWkatgkd+e+++ XP_023002504.1 15 LPPGFRFHPTDEELITHYLSQKVVCSGFCS-PAIAEVDLNKCEPWDLPGKAKMGEKEWYFFCVRDRKYPSGLRTNRATKAGYWKATGKDREIFK- 107 79*************************877.78***************99999*****************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ l+g kktLvfykgrap+g+k++Wvmheyrl XP_023002504.1 108 GRCLIGFKKTLVFYKGRAPRGQKSNWVMHEYRL 140 999****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MGKSEEEEDQ TVMELPPGFR FHPTDEELIT HYLSQKVVCS GFCSPAIAEV DLNKCEPWDL 60 PGKAKMGEKE WYFFCVRDRK YPSGLRTNRA TKAGYWKATG KDREIFKGRC LIGFKKTLVF 120 YKGRAPRGQK SNWVMHEYRL HAQSSAFSQE WVICRILKKR SGKKGDETGM SSRVLPPLME 180 SEASLVTCFS NSMEDRTEDV QFWSGHFEEE EDGGGGEVWR LKVGSSKGFE EAFGFGANHH 240 PSPPLDDLHC LWNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07680.1 | 1e-88 | NAC family protein |