PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023002453.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family SRS
Protein Properties Length: 297aa    MW: 32178.6 Da    PI: 7.5869
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023002453.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702193.19.4e-60842173153
          DUF702   3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaesk 97 
                     +g+++CqdCGnqakkdCa+ RCRtCCksrgf+C+thvkstWvpaakrrerq +              ++skr re+  ++++a+++ +l+s+   
  XP_023002453.1  84 AGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQFR------------GGDNSKRLRET--QSATATATLHLPSS--- 161
                     5789*********************************************9643............34667788876..55555555565555... PP

          DUF702  98 keletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153
                      ++e +++P+ev+s+avfrcv+vs++dd++ee+aYqtav+igGhvfkGiLydqG e
  XP_023002453.1 162 FTSELEKFPSEVNSPAVFRCVKVSAMDDEDEEFAYQTAVNIGGHVFKGILYDQGSE 217
                     4668999***********************************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MAELFYVGGR EEGPPNKEQE QQKQTQPTLF MYRNDQQIHH KGFEIWPPHY QTHFSSAVGQ  60
SHRTDSDHPS RSAFTATRPA AAIAGGINCQ DCGNQAKKDC AYLRCRTCCK SRGFHCQTHV  120
KSTWVPAAKR RERQFRGGDN SKRLRETQSA TATATLHLPS SFTSELEKFP SEVNSPAVFR  180
CVKVSAMDDE DEEFAYQTAV NIGGHVFKGI LYDQGSEVHY TAGESSSGHV GDGSVHPLNL  240
IAGPSNAAAA STTTSAATSS NPTATAAAVA SLLDPPIYPA PLNAFIAGTQ FFPPSRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G51060.13e-60SRS family protein