PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023002370.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

E2F/DP

Protein Properties

Length: 414aa MW: 47547.1 Da PI: 6.8681

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023002370.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	81.5	7.3e-26	157	222	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+ lt+kf++l++++e+g+++ln+ a+ L +v ++RRiYDi+NVLe+++liek+ n+irwkg XP_023002370.1 157 RYDSSLGFLTKKFIRLVQEAEDGTLDLNKTADIL---KV--QKRRIYDITNVLEGIGLIEKTTTNHIRWKG 222 6899****************************...88..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MLNAVEDLLL RHGHSDFRSH LRPSHSHHRG DMSLSSSSAS SSLAQPIPQC FRQYHRSSPP 60 SDQSNACDGR LALDAHSTVA MLDLKRTYDT NDSDALASKR AVASEQRMRS NDSSCEPVSN 120 ATEKQNKKLK LQKNSKSRTK KSTDEHLDGP NLSTNGRYDS SLGFLTKKFI RLVQEAEDGT 180 LDLNKTADIL KVQKRRIYDI TNVLEGIGLI EKTTTNHIRW KGGVRHEAQE LNDQVGRFKA 240 EVKSLYADER RLDELIRMKQ ELLRNLEENE NHRKNLFITE EDILQIPCFK NQTLIAVKAP 300 QASFIEVPDP DEEACFSERQ CRLIIRSTTG PIDLYLLRAE KQELEESTFH QEKVSSELQK 360 NHKISTKDTY CSSFQEFQGM QRILPLYNNM DDDYWFQSHS QVSITHLWGE EHNF

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MLNAVEDLLL RHGHSDFRSH LRPSHSHHRG DMSLSSSSAS SSLAQPIPQC FRQYHRSSPP  60
SDQSNACDGR LALDAHSTVA MLDLKRTYDT NDSDALASKR AVASEQRMRS NDSSCEPVSN  120
ATEKQNKKLK LQKNSKSRTK KSTDEHLDGP NLSTNGRYDS SLGFLTKKFI RLVQEAEDGT  180
LDLNKTADIL KVQKRRIYDI TNVLEGIGLI EKTTTNHIRW KGGVRHEAQE LNDQVGRFKA  240
EVKSLYADER RLDELIRMKQ ELLRNLEENE NHRKNLFITE EDILQIPCFK NQTLIAVKAP  300
QASFIEVPDP DEEACFSERQ CRLIIRSTTG PIDLYLLRAE KQELEESTFH QEKVSSELQK  360
NHKISTKDTY CSSFQEFQGM QRILPLYNNM DDDYWFQSHS QVSITHLWGE EHNF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	190	196	LKVQKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G47870.2	1e-77	E2F/DP family protein