PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023002332.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TALE

Protein Properties

Length: 455aa MW: 50627.2 Da PI: 5.3203

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023002332.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.5	9.5e-08	404	437	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + XP_023002332.1 404 KWPYPTEEDKAKLVQETGLQLKQINNWFINQRKR 437 469*****************************87 PP
2	ELK	28.8	2.8e-10	358	379	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ XP_023002332.1 358 ELKHELKNGYKEKIVDIREEIL 379 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MAFRDQLSRG LPLRYGNQPP EEQSERPLDS TLRSILSDQL TDHSPAGDGS KSEHLLQSTP 60 NWLNSALLRN QTPHSQYSGD SMTTAADKDI TDFLNLHTTG TNSAVSHPTG QWLSRPILHR 120 NHSDVIDEVA DAADAMIGAT TTLSRESDDL KNNSCGGGGE DVNNSDDVAI ESDGNEGAQC 180 EEAIVNWQNA RAKAEILAHP LYEQLLSAHV ACLRIATPVD QLPRIDSQLA ESQNVAAKYS 240 SLGHGSQPVV GNGKEIDQFM THYVLLLCSF KEQLQQHVRF HAMEAVYACW EIEQSLQSLT 300 GVSPGEGTGA TMSDDEEDQI DSDAIMFDGC LEGHDATGFG PLIPTESEKS LMERVRHELK 360 HELKNGYKEK IVDIREEILR KRRAGKLPGD TTSVLKAWWQ SHSKWPYPTE EDKAKLVQET 420 GLQLKQINNW FINQRKRNWH ANPSTTTTMK TKRKR

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MAFRDQLSRG LPLRYGNQPP EEQSERPLDS TLRSILSDQL TDHSPAGDGS KSEHLLQSTP  60
NWLNSALLRN QTPHSQYSGD SMTTAADKDI TDFLNLHTTG TNSAVSHPTG QWLSRPILHR  120
NHSDVIDEVA DAADAMIGAT TTLSRESDDL KNNSCGGGGE DVNNSDDVAI ESDGNEGAQC  180
EEAIVNWQNA RAKAEILAHP LYEQLLSAHV ACLRIATPVD QLPRIDSQLA ESQNVAAKYS  240
SLGHGSQPVV GNGKEIDQFM THYVLLLCSF KEQLQQHVRF HAMEAVYACW EIEQSLQSLT  300
GVSPGEGTGA TMSDDEEDQI DSDAIMFDGC LEGHDATGFG PLIPTESEKS LMERVRHELK  360
HELKNGYKEK IVDIREEILR KRRAGKLPGD TTSVLKAWWQ SHSKWPYPTE EDKAKLVQET  420
GLQLKQINNW FINQRKRNWH ANPSTTTTMK TKRKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	435	455	RKRNWHANPSTTTTMKTKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	1e-175	TALE family protein