PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023002253.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 309aa    MW: 35120.1 Da    PI: 7.4987
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023002253.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1775.2e-5551311129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeel+++yL++k+++++++  +vi+ vd++k ePwdLp+k++ +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke++  
  XP_023002253.1   5 LPPGFRFHPTDEELISYYLTQKISDSSFTS-KVIAVVDLNKNEPWDLPAKASMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKTTGKDKEIFG- 97 
                     79*************************999.99***************999999****************************************. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrle 129
                     +g+lvg+kktLvfy+grap+gek++Wvmheyrle
  XP_023002253.1  98 GGALVGMKKTLVFYQGRAPRGEKSNWVMHEYRLE 131
                     ********************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MDDNLPPGFR FHPTDEELIS YYLTQKISDS SFTSKVIAVV DLNKNEPWDL PAKASMGEKE  60
WYFFSLRDRK YPTGLRTNRA TEAGYWKTTG KDKEIFGGGA LVGMKKTLVF YQGRAPRGEK  120
SNWVMHEYRL ENNHFFKPSK EEWVVCRVFQ KQNPPKKPQQ SSSSQPCPSS PCDTNSIVNE  180
FGDIELSNFN GSSCNFTNNV SAQAYETNNM NMNMNWGAPM NDQTASISTL PSLSSWPPNP  240
NLLTSNLSMN SLLLKALQLR TMNHSQFGTN HLSFQASSSS SKVFESPQQQ QQQQQQQQQE  300
QPLNLDSLW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.12e-93NAC family protein