PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023002198.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 1012aa MW: 112789 Da PI: 4.9046 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.1 | 2e-18 | 38 | 84 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde+l +av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l XP_023002198.1 38 KGQWTAEEDEILRKAVQRFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 84 799****************************9.************986 PP | |||||||
2 | Myb_DNA-binding | 66.8 | 4e-21 | 90 | 136 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde++v++v+++G++ W+tIa++++ gR +kqc++rw+++l XP_023002198.1 90 KGPWSKEEDEIIVELVQKYGPKKWSTIAQHLP-GRIGKQCRERWHNHL 136 79******************************.*************97 PP | |||||||
3 | Myb_DNA-binding | 47.6 | 3.7e-15 | 142 | 184 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE+ l++a++ +G++ W+ + ++ gRt++ +k++w+ XP_023002198.1 142 KEAWTQEEEIALIRAHQIYGNR-WAELTKFLP-GRTDNAIKNHWN 184 579*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1012 aa Download sequence |
MESDPALCTP LDAPGDSCQN IRSIHSRRTS GPTRRSTKGQ WTAEEDEILR KAVQRFKGKN 60 WKKIAECFKD RTDVQCLHRW QKVLNPELVK GPWSKEEDEI IVELVQKYGP KKWSTIAQHL 120 PGRIGKQCRE RWHNHLNPAI NKEAWTQEEE IALIRAHQIY GNRWAELTKF LPGRTDNAIK 180 NHWNSSVKKK LDSYLASGLL EQYQPLHCTL QSSLPKHSSS RVQSSIDDSS LRGTETEDIS 240 EVSQTSAIVA CSTTVPRTEE EGQLGEAAFL KEEPISTPHC PEQYNASLDN ITFSIPEMFG 300 ELDCYVKPPD QNFSQDCRTS STEDNRYNLY ELPNISSLEL GRELSQSQAI GSQEVENVPH 360 QTSAGLNAST VENMARGSDK SEQMLISDYE CCRVLFSDGI NNESFPSENT SDASNMVELS 420 GYTHPLHCQS LSIEMQESRR NLSMQSYHHS RTDVLDNSSS QPFLAPLLVS ANDDTYVYTS 480 EASHLFATLE RELVANEHDG FIYTNESAES PPEDGTKDAD LQKQQGSNDP SKLVPVNTFS 540 SEPKTAQSFP SFRERENTQS DQQDVGALCY EPPRFPSLDV PFLSCDLAAP STSDMQQEYS 600 PLGIRQLMMS SMNCLTPFRL WNSPSRDDSP DAVLKSAAKT FTNTPSILKK RHREFFSPLS 660 EKQRDKKQEI DIGISRTSHP TSNSRDSEDK ENIIPVEEGR QEKQSDGSNI LLSKCPERNL 720 DSCSFLENKR QELDDAVKTE GVDSVGQTVQ PPSRILIECD MNDSLLYSTD HDGVRADTNR 780 GSSEEISESQ CRTSTALQDL DFPSKLSDDQ CTRANCSIAN ETSHGSHPPT APPEIIGDDA 840 SKETSIETLF GGTPFKRSIE SPSAWKSPWF INSFLFGSRM DSDVAMEEVG FFMSPGDRSY 900 DAIGLMKQVG EHTAAACANA QEVLGGETPQ SLLKGERRKY ENRIKEKSPA TNSRQGVVHS 960 TSAPDILKER RILDFSECGT PVKGTENGKS SSASATGRSF SSPSSYLLKG CR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11510.1 | 0.0 | MYB family protein |