PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023002154.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 223aa MW: 25823.3 Da PI: 9.6261 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.3 | 3e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskR++g+lKKA+E+SvLCdaeva+i+fs++gkl+eyss XP_023002154.1 9 KRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSS 59 79***********************************************96 PP | |||||||
2 | K-box | 101 | 1.7e-33 | 86 | 176 | 10 | 100 |
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +e +e+++ e+ +Lk+++e Lqr++ h++GedL+sLs+keLq+Leqq++++lk++Rs+Kn+l++++i+ lq+ke+++qe+n L k+++e XP_023002154.1 86 SEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRSRKNQLMHDSISALQRKERAIQEQNALLAKQIKE 176 555689**********************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MGRGRVQLKR IENKINRQVT FSKRKAGLLK KAHEISVLCD AEVALIVFSH KGKLFEYSSD 60 SSMEKILERY ERYSYVGRQQ IAATESEFSQ ENWTLEYYRL KSRVELLQRN NSHYMGEDLD 120 SLSVKELQNL EQQIDTALKH VRSRKNQLMH DSISALQRKE RAIQEQNALL AKQIKEKEKS 180 AAMAQQAEWE QQQQHGYNAL SFLFPSAPHP SLNIGLASFD GHL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 1e-98 | MIKC_MADS family protein |