PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023002109.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Whirly
Protein Properties Length: 274aa    MW: 30741.1 Da    PI: 9.6947
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023002109.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly210.81.5e-65932301138
          Whirly   1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalk 95 
                     s+yk+kaal+++++ p+f+ +dsg++k++r+G+++l+la+a+++r+ydW++kq+f+ls te+++lv l+++esceffhdp +++s+eGkvrk lk
  XP_023002109.1  93 SIYKGKAALSIEPRPPEFTPIDSGAFKVSRQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILK 187
                     7********************************************************************************************** PP

          Whirly  96 vePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsll 138
                     vePlpdGsG+f+nlsv+n+l++++es+++P++kae++vl +++
  XP_023002109.1 188 VEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAF 230
                     ***************************************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MLRLQWLSSS LLPPLNPELC AQPCKNPRRC RFNSSRQLFT LTATRKPSPK CQYASWNTQQ  60
PAFEPASQTD SYSPQTRAGA AAALPPRFFV GHSIYKGKAA LSIEPRPPEF TPIDSGAFKV  120
SRQGFVMLQL APAAGVRQYD WSRKQVFSLS LTELGSLVAL GPRESCEFFH DPYKGKSDEG  180
KVRKILKVEP LPDGSGHFFN LSVQNKLINV DESIYIPITK AEYTVLVEAF KFILPHLMGW  240
HTIANTMMRP EDSSRVNNAN PRYGGESGDF EWSR