PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023002053.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 490aa MW: 56596.9 Da PI: 7.5168

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023002053.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	35.1	3.4e-11	94	147	1	57
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenl 57 +W+++e laL+++r+++++ + ++ We+vs++ e gf+r+p++Ckek+e+ XP_023002053.1 94 QWSNDELLALLRIRSNIDNCFPES-----TWEHVSRYRklGEVGFTRTPEKCKEKFEDE 147 7****************99998.....9*986669**************96 PP
2	trihelix	90.7	1.5e-28	367	467	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk................lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 rW+++evlaL+++r ++ ++ ++++ lk+plWe++s+ m + g++rs+k+Ckekwen+nk+++k+k+ +kkr s +s+tc XP_023002053.1 367 RWPRDEVLALVNVRCSLYDNNSNNNnnsdqdksggtdqatlLKAPLWERISQGMLQLGYKRSAKRCKEKWENINKYFRKTKDVNKKR-SIDSRTC 460 8***********944333333222455566677777888*****************************************8.78889 PP trihelix 80 pyfdqle 86 pyf+ql XP_023002053.1 461 PYFHQLS 467 *****95 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MFEGSVSEQL HQFLAPRTTT TTTTTTPPNS NSLPFLLHSP NFNFHPFDSY NPSSNHHLVH 60 QSSENDNETT TTTTTMANLS VAMDLEEDHH HHNQWSNDEL LALLRIRSNI DNCFPESTWE 120 HVSRYRKLGE VGFTRTPEKC KEKFEDEKTE DGGAVVVVPE EAKHERGNDN NDDNDEQQQS 180 SKSKKKRKTR TTRQREFEVL KGYCEDIVKN MMIQQEEIHS KLLHEMLKRE EEKIAKEECW 240 KKQQMERFHK ELQMMAQEQA IASDRQATII EILNQISISN PFSSSKSKKD LQNLLHSLNH 300 HHNNNNNLPN SPSSSSLIQT QNPKNPSSST QILPPQDPNS NPPPFSIQKL PQNPKTREKE 360 VDDVGKRWPR DEVLALVNVR CSLYDNNSNN NNNSDQDKSG GTDQATLLKA PLWERISQGM 420 LQLGYKRSAK RCKEKWENIN KYFRKTKDVN KKRSIDSRTC PYFHQLSTLY NQGGNRSMEN 480 LPDNVVRKPL

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MFEGSVSEQL HQFLAPRTTT TTTTTTPPNS NSLPFLLHSP NFNFHPFDSY NPSSNHHLVH  60
QSSENDNETT TTTTTMANLS VAMDLEEDHH HHNQWSNDEL LALLRIRSNI DNCFPESTWE  120
HVSRYRKLGE VGFTRTPEKC KEKFEDEKTE DGGAVVVVPE EAKHERGNDN NDDNDEQQQS  180
SKSKKKRKTR TTRQREFEVL KGYCEDIVKN MMIQQEEIHS KLLHEMLKRE EEKIAKEECW  240
KKQQMERFHK ELQMMAQEQA IASDRQATII EILNQISISN PFSSSKSKKD LQNLLHSLNH  300
HHNNNNNLPN SPSSSSLIQT QNPKNPSSST QILPPQDPNS NPPPFSIQKL PQNPKTREKE  360
VDDVGKRWPR DEVLALVNVR CSLYDNNSNN NNNSDQDKSG GTDQATLLKA PLWERISQGM  420
LQLGYKRSAK RCKEKWENIN KYFRKTKDVN KKRSIDSRTC PYFHQLSTLY NQGGNRSMEN  480
LPDNVVRKPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28300.1	1e-72	Trihelix family protein