PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023001938.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | bHLH | ||||||||
Protein Properties | Length: 377aa MW: 41015.5 Da PI: 5.4326 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 50.9 | 2.7e-16 | 197 | 243 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ E+rRR+riN+++ L+ l+P++ K +Ka++L +A+eY+k+Lq XP_023001938.1 197 VHNMSEKRRRRRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 243 6*************************7.....5******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 377 aa Download sequence |
MADLYGTSPS SDVVGLPHDP ENFSSFINQH LQTTTSSASS PSCVSFKNKF MPFLHSQPPW 60 HSSSLFSRRR GESTSIAGVS CMLDFPESRF QLSRVLNHAQ SDSRFGDASY LAVNSTCGAV 120 KLSDPGDFVK ESSDNNVFSS SGAVDSDTNA PFKRRGLSSE NDLGDFSCDS EGADVPEAPS 180 STDLPRSSSK RSRSAEVHNM SEKRRRRRIN EKMKALQNLI PNSNKTDKAS MLDEAIEYLK 240 QLQLQVQMLS MRNGSSLQPM CLPGMLQPMQ LPEMGLDFDV GNAFLASRRG ISALSPGNEG 300 CPMQSTFNLS NKCNLSDQSL AIPSVPNITT SETTFGFESA IQAYDGQFDL SSNFKEAQPA 360 TQLDCCAQTR KDSANAS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 203 | 208 | KRRRRR |
2 | 203 | 209 | KRRRRRI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36930.1 | 2e-39 | bHLH family protein |