PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023001905.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C2H2 | ||||||||
Protein Properties | Length: 445aa MW: 46324.2 Da PI: 8.9627 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17.4 | 1.2e-05 | 62 | 84 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_023001905.1 62 FVCEICNKGFQRDQNLQLHRRGH 84 89*******************88 PP | |||||||
2 | zf-C2H2 | 15.9 | 3.6e-05 | 138 | 160 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+k + +s+ k H++t+ XP_023001905.1 138 WKCERCSKKYAVQSDWKAHMKTC 160 58*******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 445 aa Download sequence |
MVSAENNSPT AALTASSTQG VELESMDAVA PLKKKRNLPG MPDPTAEVIA LSPKSLLATN 60 RFVCEICNKG FQRDQNLQLH RRGHNLPWKL RQRTSNEIRK RVYVCPEASC VHHNPARALG 120 DLTGIKKHYS RKHCEKKWKC ERCSKKYAVQ SDWKAHMKTC GTREYRCDCG TLFSRRDSFI 180 THRAFCDALV FASTNSNAMV PAAAAVGSSP PAPPLTPSTT VLSPALSIQS SEPPDNPIGP 240 PPLTPPVTGL TSPTASNING CGISGGTSVF AGVFASPPIS AQNPPHQITT SGNRSDGVNN 300 PQTTAIESTS LSLSMSLFLS CTASASGSSL FQEHPPHYSS SPQPAAMSAT ALLQKAAQMG 360 VTASNAASFL RGSGLSISPS PSQATFASMT AGLELGFGNE PATRDLLGLS MGGATPGSGF 420 SGLFTSFGEA AAPYGGGGGG GSNGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50700.1 | 1e-107 | C2H2 family protein |