PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023001838.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HSF | ||||||||
Protein Properties | Length: 356aa MW: 40587.5 Da PI: 4.6082 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 104.9 | 6.9e-33 | 43 | 135 | 2 | 103 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+++++ed+ +++++sws+ nsf+v+d ++++++Lp+yFkhsnf+SF+RQLn+YgF+kv+ ++ weF+++ F g+++ll++ XP_023001838.1 43 FLSKTFDMVEDPLTDSIVSWSKARNSFIVWDYLKLSTTLLPRYFKHSNFSSFIRQLNTYGFRKVDPDR---------WEFANEGFLGGQRNLLKT 128 9****************************************************************999.........****************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 ikr++++ XP_023001838.1 129 IKRRRHS 135 ***9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 356 aa Download sequence |
MDELEAKTKP DGVPASSSST SPSSLRTAPR PIEGLHDVGP PPFLSKTFDM VEDPLTDSIV 60 SWSKARNSFI VWDYLKLSTT LLPRYFKHSN FSSFIRQLNT YGFRKVDPDR WEFANEGFLG 120 GQRNLLKTIK RRRHSSQSSQ QQGGTCVELG QFGLEGELER LRRDRSSLIV ELVRLRQQHQ 180 SSREQVMAME DRLQKAESKQ KQIMTFLSKA LKNPSFIQKL IHSNQIRELT SVGIGRKRRL 240 TASPSLENLQ DETILAAVKQ EQLETPEPDM ESLLTANFED ESSSEIKDVG HSIHEEILDE 300 LWNEDFMAEN PEEEGVMVGD QSEIDVEVED LIAEPPDWTE DLEELVDQMG FLQPKP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 126 | 132 | LKTIKRR |
2 | 160 | 165 | RLRRDR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26150.1 | 1e-103 | HSF family protein |