PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023001729.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NAC | ||||||||
Protein Properties | Length: 348aa MW: 38461.6 Da PI: 9.1828 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 169.9 | 8.1e-53 | 22 | 149 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yLk+k+++++l++ +i+e+d+yk++PwdLp+k+ +++ewyfF++r++ky++g r+nra+ sgyWkatg+dk+++++ XP_023001729.1 22 LPPGFRFHPTDEELVVHYLKRKLSSSPLPA-PIIAELDLYKFDPWDLPSKAVFGKNEWYFFTPRERKYPNGARPNRAAISGYWKATGTDKPIMTS 115 79***************************9.88***************77778999*************************************99 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kk Lvfy gr pkg kt+W+mheyrl XP_023001729.1 116 nGTQKVGVKKALVFYGGRPPKGIKTNWIMHEYRL 149 67788***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 348 aa Download sequence |
MMDPDYMEST DSSSNTSAHL QLPPGFRFHP TDEELVVHYL KRKLSSSPLP APIIAELDLY 60 KFDPWDLPSK AVFGKNEWYF FTPRERKYPN GARPNRAAIS GYWKATGTDK PIMTSNGTQK 120 VGVKKALVFY GGRPPKGIKT NWIMHEYRLL HAANTNLKPL DAYPTNRKPS LKLDDWVLCR 180 IYMKNAAQAS TIIEREMEEL SRAAAAAAAR LPKLVVGGGQ KGGRNCYLDV VALSSEGDEI 240 INHQTNSNIS ELPSSSCSSK RGLTCQLWSG GATASNDGGK PLRLDLMNSY SGGVTPVTEE 300 NTVSYVSLLN QLSVQNAAFQ TREPFIGSLS DGVLRQQFQL PSNINWNS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61110.1 | 3e-92 | NAC family protein |