PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023001651.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 569aa MW: 61211.8 Da PI: 8.1574

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023001651.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.8	6.1e-30	227	286	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt + +Cpv+k+v+r+a+d +++++tYeg+Hnh+ XP_023001651.1 227 MNDGCQWRKYGQKIAKGNPCPRAYYRCTGSpTCPVRKQVQRCADDMSILITTYEGNHNHP 286 58************************888**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
MEAAAPAFGR PRPVVKPEKP AGDSDDDRDS PSNQHLLIKE EQLESARTEM GEVREENQRL 60 KMSLGQIMKD YEALKMQFLG IVGREAKKLP EHNKEQQQRP HDDQTEETEL VSLTLGRYPM 120 AEKKKAVEEK NINGGDKEEV VKQALSLGLN CKFEQESTAA TVKEANSPNR SLTISADHET 180 KEDAGETNWP PSKGLKTMRS VDDDALPTNP PKRARVCVRA RCETTTMNDG CQWRKYGQKI 240 AKGNPCPRAY YRCTGSPTCP VRKQVQRCAD DMSILITTYE GNHNHPLPAS ATAMASTTSA 300 AASMLLSGSS TSSAPNTTAA ASSSSSSSSH ALSFYSNSKQ NFYLPNNSSI ISSTSPTHPT 360 ITLDLTSNPS SSSSNPSTHF GKFPSSFPNS RYPFTSQLDF GSSRNNVLSW NNGVLSYNRN 420 NHPTTTPTNN IYQNYLQHQR NTAMSLPHQQ PPLPDTIAAA TKAITADPSF QSALAAALTS 480 IIGSGGTSAG TVKSSARGEQ PLFQLTSTAT TTTNKGNGCG TSFLSNITTA TPSNSPPTGN 540 MAFVPANSLP FSNPKSASAS PGDHIDLTN

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

MEAAAPAFGR PRPVVKPEKP AGDSDDDRDS PSNQHLLIKE EQLESARTEM GEVREENQRL  60
KMSLGQIMKD YEALKMQFLG IVGREAKKLP EHNKEQQQRP HDDQTEETEL VSLTLGRYPM  120
AEKKKAVEEK NINGGDKEEV VKQALSLGLN CKFEQESTAA TVKEANSPNR SLTISADHET  180
KEDAGETNWP PSKGLKTMRS VDDDALPTNP PKRARVCVRA RCETTTMNDG CQWRKYGQKI  240
AKGNPCPRAY YRCTGSPTCP VRKQVQRCAD DMSILITTYE GNHNHPLPAS ATAMASTTSA  300
AASMLLSGSS TSSAPNTTAA ASSSSSSSSH ALSFYSNSKQ NFYLPNNSSI ISSTSPTHPT  360
ITLDLTSNPS SSSSNPSTHF GKFPSSFPNS RYPFTSQLDF GSSRNNVLSW NNGVLSYNRN  420
NHPTTTPTNN IYQNYLQHQR NTAMSLPHQQ PPLPDTIAAA TKAITADPSF QSALAAALTS  480
IIGSGGTSAG TVKSSARGEQ PLFQLTSTAT TTTNKGNGCG TSFLSNITTA TPSNSPPTGN  540
MAFVPANSLP FSNPKSASAS PGDHIDLTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	1e-61	WRKY family protein