PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023001649.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 602aa MW: 65134.9 Da PI: 7.7568

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023001649.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.7	6.6e-30	260	319	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt + +Cpv+k+v+r+a+d +++++tYeg+Hnh+ XP_023001649.1 260 MNDGCQWRKYGQKIAKGNPCPRAYYRCTGSpTCPVRKQVQRCADDMSILITTYEGNHNHP 319 58************************888**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 602 aa Download sequence
MEAAAPAFGR PRPVVKPEKP AGDSDDDRDS PSNQHLLIKT YQRENRAKEE NESEDKTSHS 60 SDQNDLRCTK IQEEQLESAR TEMGEVREEN QRLKMSLGQI MKDYEALKMQ FLGIVGREAK 120 KLPEHNKEQQ QRPHDDQTEE TELVSLTLGR YPMAEKKKAV EEKNINGGDK EEVVKQALSL 180 GLNCKFEQES TAATVKEANS PNRSLTISAD HETKEDAGET NWPPSKGLKT MRSVDDDALP 240 TNPPKRARVC VRARCETTTM NDGCQWRKYG QKIAKGNPCP RAYYRCTGSP TCPVRKQVQR 300 CADDMSILIT TYEGNHNHPL PASATAMAST TSAAASMLLS GSSTSSAPNT TAAASSSSSS 360 SSHALSFYSN SKQNFYLPNN SSIISSTSPT HPTITLDLTS NPSSSSSNPS THFGKFPSSF 420 PNSRYPFTSQ LDFGSSRNNV LSWNNGVLSY NRNNHPTTTP TNNIYQNYLQ HQRNTAMSLP 480 HQQPPLPDTI AAATKAITAD PSFQSALAAA LTSIIGSGGT SAGTVKSSAR GEQPLFQLTS 540 TATTTTNKGN GCGTSFLSNI TTATPSNSPP TGNMAFVPAN SLPFSNPKSA SASPGDHIDL 600 TN

Sequence ? help Back to Top

Protein Sequence Length: 602 aa Download sequence

MEAAAPAFGR PRPVVKPEKP AGDSDDDRDS PSNQHLLIKT YQRENRAKEE NESEDKTSHS  60
SDQNDLRCTK IQEEQLESAR TEMGEVREEN QRLKMSLGQI MKDYEALKMQ FLGIVGREAK  120
KLPEHNKEQQ QRPHDDQTEE TELVSLTLGR YPMAEKKKAV EEKNINGGDK EEVVKQALSL  180
GLNCKFEQES TAATVKEANS PNRSLTISAD HETKEDAGET NWPPSKGLKT MRSVDDDALP  240
TNPPKRARVC VRARCETTTM NDGCQWRKYG QKIAKGNPCP RAYYRCTGSP TCPVRKQVQR  300
CADDMSILIT TYEGNHNHPL PASATAMAST TSAAASMLLS GSSTSSAPNT TAAASSSSSS  360
SSHALSFYSN SKQNFYLPNN SSIISSTSPT HPTITLDLTS NPSSSSSNPS THFGKFPSSF  420
PNSRYPFTSQ LDFGSSRNNV LSWNNGVLSY NRNNHPTTTP TNNIYQNYLQ HQRNTAMSLP  480
HQQPPLPDTI AAATKAITAD PSFQSALAAA LTSIIGSGGT SAGTVKSSAR GEQPLFQLTS  540
TATTTTNKGN GCGTSFLSNI TTATPSNSPP TGNMAFVPAN SLPFSNPKSA SASPGDHIDL  600
TN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	3e-61	WRKY family protein