PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023001231.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 728aa    MW: 80901.8 Da    PI: 6.008
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023001231.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox611.9e-1963118156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     r++ +++t+ q++e+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R++ k
  XP_023001231.1  63 RKRYHRHTQLQIQEMEAFFKECPHPDDKQRKELSRELGLDPLQVKFWFQNKRTQLK 118
                     789999**********************************************9877 PP
2START189.22e-592484671206
                     HHHHHHHHHHHHHHHHC-TT-EEEE...EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss...esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 
                     ela +a++el ++a a+ep+Wv      e++n+de+l++ +++ +      s ea+r++ +v  ++ +lv +l+d++ qW++t+     +a tle
  XP_023001231.1 248 ELAVSAMEELCRMAHAGEPLWVPGEnsmEMLNEDEYLRTYSTGIGprilgLSFEASRETSIVAFNHLKLVDILMDVN-QWSNTFCgivsRALTLE 341
                     57899*****************888888************99999********************************.******999******** PP

                     EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE CS
           START  84 vissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvd 171
                     v+s+g      gal++m+ae+q++splvp R+ +fvRy++q+++ +w++vdvS+d  ++ p+     R +++pSg+li++++ng+sk+ wvehv+
  XP_023001231.1 342 VLSTGvggnynGALHVMTAEFQVPSPLVPtRENYFVRYCKQQTDRSWAVVDVSLDYLRPTPT----SRTRRRPSGCLIQELPNGYSKIMWVEHVE 432
                     ***********************************************************995....78889************************ PP

                     --SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 172 lkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     +++r++h+l++++v  gla+gak+wvatl+rqc++
  XP_023001231.1 433 VDDRSVHNLYKRVVTCGLAFGAKRWVATLDRQCQR 467
                     *********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 728 aa     Download sequence    
MLGGHDYEEH HDEEDVVLLE MTQKNFETEL EKFGEDDQME SSRSVKDAAM GEDPFLHNPT  60
NKRKRYHRHT QLQIQEMEAF FKECPHPDDK QRKELSRELG LDPLQVKFWF QNKRTQLKAQ  120
HERHENAILK AQNEKLRAEN MRYKEALSNT SCPNCGGPAA LGEMSFDDQH LRIDNAQLRD  180
EIERLNSVAS KFAGKPWASH SRIPPCALDL GVGRALQPPQ AEFLGEIYGV GDMLKSVTTE  240
IDKPVIVELA VSAMEELCRM AHAGEPLWVP GENSMEMLNE DEYLRTYSTG IGPRILGLSF  300
EASRETSIVA FNHLKLVDIL MDVNQWSNTF CGIVSRALTL EVLSTGVGGN YNGALHVMTA  360
EFQVPSPLVP TRENYFVRYC KQQTDRSWAV VDVSLDYLRP TPTSRTRRRP SGCLIQELPN  420
GYSKIMWVEH VEVDDRSVHN LYKRVVTCGL AFGAKRWVAT LDRQCQRLTN SSAANIPAVD  480
ICVVTGQEGR RSVMKLAERM VRSFCSGVGA ASAHNWTTLS TIDSDHVRVM ARKSLDDPGR  540
PPGIVLNAAT SFWIPIPPNR VFHFLRDQNT RSQWDVLSNG GLVQEMARIG NDRNPGNCVS  600
LLRVNSTNSS QSNMLILQES CSDISGCYIT YAPVDTVAMN MVLSGGDPDY VALLPSGFAI  660
LPDGPSGPDA PAGILEFGSG GSLLTVAFQI LVDSVPTAKL SLGSVATVNS LIKCTVERIR  720
AAVMCEHP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21750.20.0HD-ZIP family protein