PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023001168.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SBP

Protein Properties

Length: 310aa MW: 34309.1 Da PI: 8.664

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023001168.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	134.1	4.6e-42	25	101	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC++dls++++yhrrhkvCe hsk+p+v+++gl+qrfCqqCsrfh+l+efDe+krsCr+rL++hn+rrrk+q+ XP_023001168.1 25 CLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAGLNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQT 101 **************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
MAPSTSGSSK RARGAHSGAI QPVSCLVDGC NSDLSNCRDY HRRHKVCELH SKTPQVTIAG 60 LNQRFCQQCS RFHSLEEFDE GKRSCRKRLD GHNRRRRKPQ TDLLPRSAGH FSYHQGAHLL 120 PFTSSQVFPP TTLSSHGWSS AGDPSVFHNQ NHELNFLEKQ RLFVEPSSYK AAQPLGFLHG 180 GPTTCRPLLR SINTLSENSG GERNKMVYYK FRVGVSESDC ALSLLSSSQQ AAESGSSGHL 240 GLSRIEQEQQ QRSAAISLLQ PLSHHHHKLD SFETSESSSV HGAVNFPEIF GIPSENAGNQ 300 SPSTLPFHWE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	82	99	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	6e-52	SBP family protein