PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023001145.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 708aa    MW: 78621.1 Da    PI: 6.7877
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023001145.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.72.7e-202579256
                    T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    +  +++t++q+++Le++F+++++p++++r +L+++lgL  rq+k+WFqNrR+++k
  XP_023001145.1 25 KCYHRHTANQIQRLEAMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMK 79
                    667899**********************************************998 PP
2START167.21.2e-522224452205
                     HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     +a  a++el+++ + +ep+W ks     + ++ +++ q f++ ++      +++ea r+sgvv+m+++ lv  ++d + +W+e ++     a t+
  XP_023001145.1 222 IATNAMAELLRLSQTNEPFWIKSTndgrDVLDLETYEQAFPRPNSpfknphFRTEATRDSGVVIMNSEALVDMFMDLN-KWTELFPtivsIARTI 315
                     77899*******************8888888888888888887779********************************.*******999999*** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     evissg      g lqlm++elq+lsplv+ R f+++R+++q + g+w++vdvS + +++++   s   +++lpSg+li++++ng+skvtw+ehv
  XP_023001145.1 316 EVISSGllgtqnGSLQLMYQELQLLSPLVStRHFYILRFCQQIEHGTWAVVDVSYNIPRENQ-VVSHSQCHRLPSGCLIQDMPNGYSKVTWIEHV 409
                     *************************************************************9.5888899************************* PP

                     E--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXX CS
           START 171 dlkgrlp.hwllrslvksglaegaktwvatlqrqce 205
                     ++++r   hwl r l++sgla+ga +w+atlqr  e
  XP_023001145.1 410 EVEDRGSsHWLCRDLIHSGLAFGAERWLATLQRMSE 445
                     ****9888************************9877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 708 aa     Download sequence    
MEFGTGGGGS GWDNDSSSDP QRRKKCYHRH TANQIQRLEA MFKECPHPDE KQRLQLSREL  60
GLAPRQIKFW FQNRRTQMKA QHERADNSAL RAENDKIRCE NIAIREALKN VICPSCGGPP  120
LQDPYFDEHK LRIENAHLKE ELDRVSSIAA KFIGRPISQL PPIHPPHFSS LDLSMASFPS  180
QEIGCPSLDL DLLPASSTSV PTLPYHHPIH LSAVDKSLMT EIATNAMAEL LRLSQTNEPF  240
WIKSTNDGRD VLDLETYEQA FPRPNSPFKN PHFRTEATRD SGVVIMNSEA LVDMFMDLNK  300
WTELFPTIVS IARTIEVISS GLLGTQNGSL QLMYQELQLL SPLVSTRHFY ILRFCQQIEH  360
GTWAVVDVSY NIPRENQVVS HSQCHRLPSG CLIQDMPNGY SKVTWIEHVE VEDRGSSHWL  420
CRDLIHSGLA FGAERWLATL QRMSERLACL MMTGSSNQDL GGVIPSSEGK RSMMKLAQRM  480
VNNFCASISS SHGHRWTTLS GMNEVGVRVT VHKSMDPGQP NGVVLSAATT IWLSVSPQTI  540
FNFFKNDRTR SQWDVLSDGN PVQEVAHITN GSHPGNAISV LRAFNTSQNN MLILQESCID  600
SSGSLVVYCP VDLPAMNVVM SGEDPSSIPL LPSGFTILPD GRRDQGEGTS SSLDVHSRSG  660
GSLLTVAFQI LVSSLPSGKL NLESVTTVNN LISTTLHQIK TALNCHSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein