PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023001130.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 574aa MW: 63973.8 Da PI: 8.4178

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023001130.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.6	6.9e-11	266	325	2	55
HHHHHHHHHHHHHHHHH..........HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNs..........afeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN+ +f++LrellP + ++K +Ka+ L +++eYI+ Lq XP_023001130.1 266 RSKHSATEQRRRSKINDrqdftdiftcRFQKLRELLPCS----DQKRDKASFLLEVIEYIQFLQ 325 889************55555555555******9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 574 aa Download sequence
MELPQPSRPL RTEGRKPTHD FLSLYSHSTA DQQDPSQSFQ GGFLTTHDFL QPLERIEKTC 60 AKKEHTMNVS TVERAAPPLT TLARNSPVER LLPGGIGSCI IGHISYFNHR VPKTEGSVFP 120 VPQASNTDKS DDNSRCSSLS ASGFTLWEES AVKKGKTRKE NLSEKPGLRA EPPAKMEQWA 180 VSTERPIQSS CSSFSSLSSS QPSCQQKRSF GEMLKSAANV TSKEEKLDDG KAFVIKKESS 240 PSTAYRGDLR INVGGKCSDQ KANTPRSKHS ATEQRRRSKI NDRQDFTDIF TCRFQKLREL 300 LPCSDQKRDK ASFLLEVIEY IQFLQEKVRK YESSPPQGWY DEPAKLLHCR NNCNPAQCYI 360 DQSQVAKSGP VFIFAGSDQK NMSHFPAFLP RCSHNPVESN TSTTFGEADH HLGTTNKATS 420 YPMLDPRYFI PVTSEGEKTK IYSQVAHNAD KKPYEMQQLL WETRACTTDI AAVDNKLKEP 480 EQSIEGGRIS ISSAYSQELL KILTQALQSS GVDMSQASIA VQIELGKRTN CRDTAANPAI 540 VDDSARPSER AVVVSRVAAV EEDMEQAFRK KQNT

Sequence ? help Back to Top

Protein Sequence Length: 574 aa Download sequence

MELPQPSRPL RTEGRKPTHD FLSLYSHSTA DQQDPSQSFQ GGFLTTHDFL QPLERIEKTC  60
AKKEHTMNVS TVERAAPPLT TLARNSPVER LLPGGIGSCI IGHISYFNHR VPKTEGSVFP  120
VPQASNTDKS DDNSRCSSLS ASGFTLWEES AVKKGKTRKE NLSEKPGLRA EPPAKMEQWA  180
VSTERPIQSS CSSFSSLSSS QPSCQQKRSF GEMLKSAANV TSKEEKLDDG KAFVIKKESS  240
PSTAYRGDLR INVGGKCSDQ KANTPRSKHS ATEQRRRSKI NDRQDFTDIF TCRFQKLREL  300
LPCSDQKRDK ASFLLEVIEY IQFLQEKVRK YESSPPQGWY DEPAKLLHCR NNCNPAQCYI  360
DQSQVAKSGP VFIFAGSDQK NMSHFPAFLP RCSHNPVESN TSTTFGEADH HLGTTNKATS  420
YPMLDPRYFI PVTSEGEKTK IYSQVAHNAD KKPYEMQQLL WETRACTTDI AAVDNKLKEP  480
EQSIEGGRIS ISSAYSQELL KILTQALQSS GVDMSQASIA VQIELGKRTN CRDTAANPAI  540
VDDSARPSER AVVVSRVAAV EEDMEQAFRK KQNT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	1e-88	bHLH family protein