PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023001123.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NAC | ||||||||
Protein Properties | Length: 249aa MW: 28589.9 Da PI: 5.0498 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 176.2 | 9e-55 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv++yLk+k++g+ +el ++i+evd+yk+ePw+L k + +++ ewyfF +rd+ky++g r+nrat++gyWk+tgkd++v+ XP_023001123.1 6 LPPGFRFHPTDEELVNYYLKRKISGQVIEL-DIIPEVDLYKCEPWELSeKsFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVT 99 79****************************.99**************84335556888************************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s +++++g+kktLv+y+grap+g +tdWvmheyrl XP_023001123.1 100 S-HQRAIGMKKTLVYYRGRAPQGIRTDWVMHEYRL 133 *.999****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MAPVGLPPGF RFHPTDEELV NYYLKRKISG QVIELDIIPE VDLYKCEPWE LSEKSFLPSR 60 DPEWYFFGPR DRKYPNGFRT NRATRAGYWK STGKDRRVTS HQRAIGMKKT LVYYRGRAPQ 120 GIRTDWVMHE YRLDDKDCED SSGIQDSYAL CRVFKKNGIC SEVEEQLSGQ SSSSSLSFID 180 NSNSTSQTLV NDYETLSPDV LMPPPSSSCV EEEEKDDSWM QFITEDAWCA SNSSPIALHD 240 LSHLTFTTH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G17730.1 | 1e-128 | NAC family protein |