PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023001017.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 831aa    MW: 91514.2 Da    PI: 6.553
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023001017.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.42.5e-18563357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+++Le++++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_023001017.1  5 KYVRYTPEQVDALERVYAECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 63
                    6789*****************************************************97 PP
2START173.99.9e-551533602205
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv++  +++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+d++ W ++++ +++l vis+g  g+++l 
  XP_023001017.1 153 IAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCNGVAARACGLVSLEPT-KVAEILKDRLSWFRDCRCVDVLSVISTGngGTIELL 246
                     68999*****************************************************.8999999999************************** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++++a+++l++ Rdf+++Ry+ +l++g++vi+++S++s +  p+    ss+vRae+lpSg+li+ +++g s +++v+hvdl++++++++lr+l+
  XP_023001017.1 247 YTQTYAPTTLAAaRDFWTLRYTTSLEDGSLVICERSLTSSTGGPSgppPSSFVRAEMLPSGYLIRACEDG-SLIHIVDHVDLDAWSVPEVLRPLY 340
                     ***************************************99999888899********************.************************ PP

                     HHHHHHHHHHHHHHTXXXXX CS
           START 186 ksglaegaktwvatlqrqce 205
                     +s+ + +++++va+l++ ++
  XP_023001017.1 341 ESTKILAQRRTVAALRYVRQ 360
                     ***************99765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 831 aa     Download sequence    
MDTSKYVRYT PEQVDALERV YAECPKPSSL RRQQLIRECP ILSNIEPKQI KVWFQNRRCR  60
EKQRKEASRL QTVNRKLTAM NKLLMEENDR LQKQVSRLVY KNGYMRQQLR TASGTTTDNS  120
CESVVMSGQH HQQQNPTKHT QKDANNPAGL LAIAEETLAE FLSKATGTAV DWVQMIGMKP  180
GPDSIGIVAV SRNCNGVAAR ACGLVSLEPT KVAEILKDRL SWFRDCRCVD VLSVISTGNG  240
GTIELLYTQT YAPTTLAAAR DFWTLRYTTS LEDGSLVICE RSLTSSTGGP SGPPPSSFVR  300
AEMLPSGYLI RACEDGSLIH IVDHVDLDAW SVPEVLRPLY ESTKILAQRR TVAALRYVRQ  360
IAHEASGEIQ LGGGRQPAVL RTFSQRLSRG FNDAVNGFVD DGWSLMDSDG VEDVTVVVNS  420
SPNKFIGSQY NQSLYPTFGG VLCAKASMLL QNVPPALLVR FLREHRSEWA DYGVDAYSAA  480
CLKSSAYAVP CARPGGFPSG QVILPLAHTV ENEEFLEVVR LEGHAMFPEE AALGGRDMYL  540
LQLCSGVDES TVGSCAQLVF APIDESFADD APLLPSGFRV IPLESKADAS AATRTLDLAS  600
TLEVRPGSAR PGGETDATNY NLRSVLTIAF QFTFENHMRD SVAAMARQYV RTVVASVQRV  660
AMAIAPSQLS SHIGPKSLPS SPEALTLSQW IVRSYRIHTG AELFQVESQS HDAILKQLWH  720
HSDTILCCSV KTNASPVFTF ANQAGLDMLE TTLVALQDIT LDKILEDAGR KILCSEFSKI  780
MQQGFAYLPA GICISSMGRP VSYEQAIAWK VLNDDDVHHC LAFMFVNWSF M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein