PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023000999.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 281aa MW: 32106.6 Da PI: 5.9143 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.2 | 2.4e-15 | 23 | 70 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd ll+ + + g+W++ a++ g++Rt+k+c++rw++yl XP_023000999.1 23 RGPWTVEEDNLLITSISIHSEGRWNLLAKRSGLRRTGKSCRLRWLNYL 70 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.5 | 4.8e-16 | 76 | 119 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ + +E++l++d++ ++G++ W++Ia++++ gRt++++k++w++ XP_023000999.1 76 RGNLSSQEQLLILDLHSKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 119 78899*****************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 281 aa Download sequence |
MSSCSEIEDE NKKKNNEEEE LRRGPWTVEE DNLLITSISI HSEGRWNLLA KRSGLRRTGK 60 SCRLRWLNYL KPDVKRGNLS SQEQLLILDL HSKWGNRWSK IAQHLPGRTD NEIKNYWRTR 120 VQKQARYLNM DTDSDAFQQL IRYYWIPRLI QKINQSSPLP PPPPPSELPG TSQAEMVSQS 180 SYGFEAAVTA TPLQIGGDLM GSSCNSSSSS SSGFQNYENY GSFVNDYWDE EHGKGEMMNW 240 TTTAVTGDAG YPVSHCHVAE TNWTHGDFTG YVPSMDELWQ F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25340.1 | 1e-71 | MYB family protein |