PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023000993.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 272aa    MW: 30216.2 Da    PI: 8.2311
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023000993.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.13e-18126180256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ +++k+q   Lee F++n++++ ++++ LA++l+L  rqV vWFqNrRa+ k
  XP_023000993.1 126 RKKLRLSKQQSALLEESFKQNSTLNPKQKQTLARHLNLRPRQVEVWFQNRRARTK 180
                     778899***********************************************98 PP
2HD-ZIP_I/II121.93.1e-39126215191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     +kk+rlsk+q++lLEesF+++++L+p++K++lar+L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en+rL+ke +eL+ +l
  XP_023000993.1 126 RKKLRLSKQQSALLEESFKQNSTLNPKQKQTLARHLNLRPRQVEVWFQNRRARTKMKQTEVDCEFLKKCCETLTNENRRLQKELQELK-AL 215
                     69*************************************************************************************9.55 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MGLDDVSQTS LVLGLGISEA ASPIINNFKN NNNNNHPTSL DFEPCALTLG FSGDVDPPPP  60
PPPHHHHPHH HLYRQASPHS SAVCSSFSGG GGGGIKRERD LSSEEVELER VCCRVSDEDE  120
DGCNTRKKLR LSKQQSALLE ESFKQNSTLN PKQKQTLARH LNLRPRQVEV WFQNRRARTK  180
MKQTEVDCEF LKKCCETLTN ENRRLQKELQ ELKALKLAHP LYMHMPAATL TMCPSCERVG  240
GVGVGDGASK PKFSMAPKPH FYNPFSNPSA AC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1125131TRKKLRL
2175183RRARTKMKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.13e-72HD-ZIP family protein