PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023000972.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family TCP
Protein Properties Length: 308aa    MW: 35062.2 Da    PI: 8.8895
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023000972.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP124.61.1e-38822253131
             TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa....seceaesssssasnsssg..... 88 
                      kkdrhski T++g+RdRR+Rls+++a++fF Lqd LG+dk skt+eWLl+qa p+i +l+++ + s+    + c ++s+s+s+snss++     
  XP_023000972.1  82 SKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQDLLGVDKGSKTVEWLLTQASPEILKLAKQRNCSHiittTVC-SNSNSNSNSNSSEAdmvsg 175
                     69*************************************************************555553322333.2333333333333367888 PP

             TCP  89 .........kaaksaakskksqksaasalnlakesrakarararertrekmr 131
                              k+ +s   ++k++k++     + ke r+kar+rar rt ek++
  XP_023000972.1 176 idevggggpKKINSCSLKRKRDKQPR--KTMCKELRQKARERARARTMEKKN 225
                     99999998755555554444444444..69999****************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MFFSTKNDDD HDHSFHLPIS FFPFPSPFEV DEQYDDQLHN FTTNSERIFT TPSPDNVLAS  60
NNNMGIGNSD QKKLKIPRKR LSKKDRHSKI TTARGLRDRR MRLSLPVARQ FFGLQDLLGV  120
DKGSKTVEWL LTQASPEILK LAKQRNCSHI ITTTVCSNSN SNSNSNSSEA DMVSGIDEVG  180
GGGPKKINSC SLKRKRDKQP RKTMCKELRQ KARERARART MEKKNQIFKD CSDHHHHHPN  240
HNKISSCSWS SPFETGGEES GATHSYNFNP AMEDENLCSF EIMTKWSPSI SSLNFLQPHE  300
FEDTNIFG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1192199LKRKRDKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18550.22e-29TCP family protein