PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023000851.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 288aa    MW: 31572.4 Da    PI: 6.2568
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023000851.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.71.7e-1592136347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++++ ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
   XP_023000851.1  92 PWTEEEHKLFLQGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 136
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MPTTEAGDVE MDAAGVTKEI MLFGVRVVVD PMRKSVSMNN LSQYEHPSEA SNEDNGRNTK  60
SNVSAAAGYA SADDAVPNSG GIRERERKRG VPWTEEEHKL FLQGLQKVGK GDWRGISRNF  120
VKTRTPTQVA SHAQKYFLRR SNLNRRRRRS SLFDITTDSV KVAAEEEQIQ LQDNSSQFQY  180
LLPPPPPPPE TGNVNGYHPV MPTFPLPVCP AILPVPIPMD NLPLRHDNLE NDTSSTAEIM  240
PLNPTTPELN LNSGALSLNL DSATSLTKHP AFQGISSMSS GDNIISVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.22e-55MYB_related family protein