PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023000710.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 359aa MW: 40767 Da PI: 5.8572 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 68 | 9.3e-22 | 10 | 53 | 2 | 45 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45 + e++ rqvtfskR+ngi+KKA+EL +LCd+++ +++fs+tgk XP_023000710.1 10 KLESTGSRQVTFSKRKNGIMKKAKELAILCDIDIVLLMFSPTGK 53 5688999************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 359 aa Download sequence |
MGRVKLKIKK LESTGSRQVT FSKRKNGIMK KAKELAILCD IDIVLLMFSP TGKPTLYQGE 60 RSSIEEVITK FAELTPQERA KRKLESLEAL KKTFKKLDHD VNIKDFVGSS SQDFEQELIN 120 EVTVLRDQIG EAHKRLSYWR NPDSISNIQQ LQQMEGLIRE SLNQTRLHKE NLRRHQLLSQ 180 EFTGQYPGGE MSLPLLMDEM QGIQPLLWLP NYGTQQITLP NEPNFLQPGD VECSFPSYPS 240 YYNPGKQIEA GVSGQVDSMP QGDGGLNELS GTSCSTLQLG EQYQYPPTCD GSSFQDEKRL 300 NLEMEMNLHG NYVDNQLNGK LDLSRSLYDD EQHPWGSIPG PCSIPMYQSS NAYHHHQPN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18750.1 | 4e-92 | M-type_MADS family protein |