PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023000709.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family M-type_MADS
Protein Properties Length: 366aa    MW: 41354.8 Da    PI: 6.0621
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023000709.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF67.99.5e-221053245
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    + e++  rqvtfskR+ngi+KKA+EL +LCd+++ +++fs+tgk
  XP_023000709.1 10 KLESTGSRQVTFSKRKNGIMKKAKELAILCDIDIVLLMFSPTGK 53
                    5688999************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    
MGRVKLKIKK LESTGSRQVT FSKRKNGIMK KAKELAILCD IDIVLLMFSP TGKPTLYQGE  60
RSSIEEVITK FAELTPQERA KRKLESLEAL KKTFKKLDHD VNIKDFVGSS SQDFEELINE  120
VTVLRDQIGE AHKRLSYWRN PDSISNIQQL QQMEGLIRES LNQTRLHKEN LRRHQLLSQE  180
FTGQYPGGEM SLPLLMDEMQ GIQPLLWLPN YGTQQITLPN EPNFLQPGDV ECSFPSYPSY  240
YNPGKQIEAG VSGQVDSMPQ GDGGLNELSG TSCSTLQLGE QYQYPPTCDG SSFQDEKRLN  300
LEMEMNLHGN YVDNQLNGKL DLSRSLYDDE QHPWGSIPGP CSIPMYQSSN AYHHHVGSLL  360
TAPSKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18750.15e-94M-type_MADS family protein