PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023000538.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 262aa MW: 31103.2 Da PI: 9.4107 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.3 | 8.7e-19 | 21 | 68 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll+++v+ +G g+W+++a+ g++R +k+c++rw +yl XP_023000538.1 21 KGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYL 68 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.8 | 1.8e-16 | 74 | 118 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T+ E+ +++++++++G++ W+tIar ++ gRt++++k++w+++ XP_023000538.1 74 RGQITPHEESIILELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 118 7888******************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MMMMMGEHFG WGKVEEEGWR KGPWTAEEDR LLIEYVRVHG EGRWNSVAQL AGLKRNGKSC 60 RLRWVNYLRP DLKRGQITPH EESIILELHA RWGNRWSTIA RSLPGRTDNE IKNYWRTHFK 120 KKVKVTSICN ERPNPRFLRK HQYQQQQQQQ YWEILRRQQQ HRELLRQQQL NQQPNMKTEL 180 SSSKPQISQE SCTPMISNYN TQITDHHDHP GSLLLSVPEA ISIEDQQLWD GFLWNFEDFQ 240 GNLTPNSAFG KANMHDLVTP FC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13480.1 | 3e-77 | MYB family protein |