PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023000378.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 301aa    MW: 34288.9 Da    PI: 9.4089
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023000378.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH31.43.3e-10122143425
                     ---SGGGGTS--TTTTT-SS-S CS
         zf-CCCH   4 elCrffartGtCkyGdrCkFaH 25 
                     + Cr f+r G C yGd+C+F H
  XP_023000378.1 122 KVCRQFQRRGKCAYGDQCRFLH 143
                     68******************** PP
2zf-CCCH36.58.2e-12203228227
                     -S---SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHgp 27 
                     kt+lC  ++ tG+C+yG+ C+FaHg+
  XP_023000378.1 203 KTRLCYLWQTTGHCSYGEVCRFAHGE 228
                     8***********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MSDPYPFHQV TPSDHEARGV WPPLRPPPWP PRYSIGRFPS FYQPTMSEVV PSRVMPSNFE  60
IPQWNNVNIG LHDNELEWRY ALASNDHTRG WLPSWRGIEF HENRLPECPI VNSRTGMATE  120
MKVCRQFQRR GKCAYGDQCR FLHKIPENTK DFGYSSQNHE VRAVASGHVM DRKSMFDQFE  180
EVRSKVQTKI VARSEIPVPV SCKTRLCYLW QTTGHCSYGE VCRFAHGEAE LQKLESCSPS  240
ERGRVGGASA TTKAAAAAGL RCSRGIGTDG KNKGSSRMKQ LFKSKEHKKK LIGIYADWLE  300
N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19360.18e-14C3H family protein