PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023000314.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 842aa    MW: 92824.4 Da    PI: 6.4327
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023000314.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.41.2e-181775357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le+l++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_023000314.1 17 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 75
                    5679*****************************************************97 PP
2START181.16.3e-571623702205
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+d + W ++++++++l+v+ ++  g+++l 
  XP_023000314.1 162 IAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPT-RVAEILKDQPSWFRDCRAVDVLNVLPTAngGTIELL 255
                     789*******************************************************.9999999999****************9999****** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++l+a+++l+p Rdf+ +Ry+  l++g++vi+++S+ ++q+ p+    +++vRae+lpSg+li+p+++g+s +++v+h+dl+ ++++++lr+l+
  XP_023000314.1 256 YMQLYAPTTLAPaRDFWLLRYTSVLEDGSLVICERSLKNTQNGPTmppVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLY 350
                     *******************************************9998899********************************************* PP

                     HHHHHHHHHHHHHHTXXXXX CS
           START 186 ksglaegaktwvatlqrqce 205
                     +s+++ ++k+++a+l+++++
  XP_023000314.1 351 ESSTVLAQKMTMAALRQLRQ 370
                     ****************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 842 aa     Download sequence    
MAMSCKDGNK HGIDNGKYVR YTPEQVEALE RLYHECPKPS SIRRQQLIRE CPILSNIEPK  60
QIKVWFQNRR CREKQRKESS RLQAVNRKLT AMNKLLMEEN DRLQKQVSQL VYENGYFRQH  120
TQSTTLGAKD TNCEPVVTSG QHNLTSQHPP PRDASPAGLL SIAEETLTEF LSKATGTAVE  180
WVQMPGMKPG PDSIGIVAIS HGCPGVAARA CGLVGLEPTR VAEILKDQPS WFRDCRAVDV  240
LNVLPTANGG TIELLYMQLY APTTLAPARD FWLLRYTSVL EDGSLVICER SLKNTQNGPT  300
MPPVQHFVRA EMLPSGYLIR PCEGGGSIIH IVDHMDLEPW SVPEVLRPLY ESSTVLAQKM  360
TMAALRQLRQ IAHEVSQSNV TGWGRRPAAL RALGQRLTRG FNEALNGFND EGWSVMGNDG  420
MDDVTILVNS SPDKLMGLNI SFANGFSSIS NAVLCARASM LLQNVPPAIL LRFLREHRSE  480
WADNNIDAFS AAAVKVGPWS LPGSRVGSFA NQVILPLAHT IEHEELLEVI KLEGVGHTPE  540
DAMIPREMFL LQLCSGMDEN AIGTCAELIF APIDASFADD APLLPSGFRI IPLDSGKETS  600
SPNRTLDLAS ALEIGPTGNR APNDTVNSGC TRSVMTIAFE FAFESHMQEH VASMARQYVR  660
SIISSVQRVA LALSPSHLSS HGGLRSPLGT PEAQTLARWI CNSYRCYLGV ELLKSGNEGG  720
GELVLKTLWH HSDAIMCCSL KPMQALPVFT FANQAGLDML ETTLVALQDI TLEKIFDDHG  780
KKTLCSEFPQ IMQQGFSCLQ GGICLSSMGR PVSYERAVAW KVLNEEENAH CVCFMFVNWS  840
FV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.10.0HD-ZIP family protein