PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023000170.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 262aa MW: 29262.1 Da PI: 9.1083

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023000170.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	107.9	5.1e-34	104	162	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s++prsYYrCt+agC vkk+vers++dp+vv++tYeg+Hnh+ XP_023000170.1 104 LDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSHDPSVVVTTYEGQHNHQ 162 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
MYIMKDEIPS CMLEFPMDSS SFKPSTLFDL FDLFSAATTP PPPPPSSSSS SDRLLNIPST 60 PNSSSDTGDL DPFNKHKLKP KNKNIKRATQ PRFAFMTKTE MDHLDDGYRW RKYGQKAVKN 120 SPYPRSYYRC TTAGCGVKKR VERSSHDPSV VVTTYEGQHN HQSPILPRGS LSPSISTSAA 180 LHPPSLLFQH QQYTYTYTPP PPPPMEVVRC GGFEPMFHCF GQERRRIGGS SPSSASFKDH 240 GLLQDMIVPS SSSSSLHILK EE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49520.1	2e-45	WRKY family protein