PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023000045.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CAMTA

Protein Properties

Length: 919aa MW: 104617 Da PI: 7.3568

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023000045.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	161	2.1e-50	35	150	4	118
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 e + rwl+++ei+aiL n + + ++ ++ + p+sg+++L+nrk++r+frkDG++wkkkkdgkt++E+he+LKvg+ve +++yYah+ +n+tf rr XP_023000045.1 35 EaSGRWLRPNEIHAILCNNKYFVIHVKPVNLPTSGTIVLFNRKMLRNFRKDGHNWKKKKDGKTIKEAHEHLKVGNVERIHVYYAHGLDNTTFVRR 129 4478***************************************************************************************** PP CG-1 98 cywlLeeelekivlvhylevk 118 cywlL+++le+ivlvhy+e++ XP_023000045.1 130 CYWLLDKTLEHIVLVHYRETQ 150 ****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 919 aa Download sequence
MSLAMKADVQ GSLVGSEIHG FHTLQELDVT NIREEASGRW LRPNEIHAIL CNNKYFVIHV 60 KPVNLPTSGT IVLFNRKMLR NFRKDGHNWK KKKDGKTIKE AHEHLKVGNV ERIHVYYAHG 120 LDNTTFVRRC YWLLDKTLEH IVLVHYRETQ EVNFSTMHLQ LQSSPSMSMN SNSGSVSDPS 180 TPCLLSEELD SRDNHGYSVD ENELSEPRDT TTAMNHEQRL HEINTLEWDE LLVTDEPFKP 240 SMPKGDRFSY FDQRSQVPTN VTNNLLGNTP LFNNPVESIG SAYMPLSSGQ TNLNVESKES 300 IPITSLDNLL NDGLLQSQDS FGRWINEVIT ESPDTVIDPA IEPSISSIHN SFTDPTLNHC 360 QSSVMEQIFN ITDISPAWAF STEKTKILIT GYFHNEYLHL ANSNILVVCG NASVNAELIQ 420 PGVYRCVVQP HSTGLVNLFV SLDGHKPISQ VLNFEYRAPL SREPVVASEQ IQKWEEFQVQ 480 MRLAHLLFST SRSLSIMSTK LSPTSLNEAR KFAVKTSDIS DSWIYLLNSI KENNTPFPQA 540 RDGVLEIILK SRLREWLIER VAEGSKKSTD FDIKGQGVIH LCAILGYTWA IHLFSWSGLS 600 INFRDKFGWT ALHWAAYYGR EKMVAVLLSV GAKPNLVTDP SSKNPLGYIA ADLASMNGYD 660 GLAAYLSEKA LVSQFNDMSL AGNVRGSLET STITDATNLD SISEEQMYMK ETLAAYRTAA 720 DAAARIQTAF RENSLKQRTR AIEFSTPEDE ARGIVAAMKI QHAYRNFESR KRMAAAARIQ 780 YRFRTWKIRK EFLNMRRHAI RIQAAFRGFQ MRRQYRKILW SVGVIDKAIL RWRLKRKGFR 840 GLQVAPAEVT EQQEIGIEED FYHVSQKQAE ERVEKAVVRV QALFRSKKAQ EEYRRMKLTY 900 DEAALEYEEL SHPDMNLSS

Sequence ? help Back to Top

Protein Sequence Length: 919 aa Download sequence

MSLAMKADVQ GSLVGSEIHG FHTLQELDVT NIREEASGRW LRPNEIHAIL CNNKYFVIHV  60
KPVNLPTSGT IVLFNRKMLR NFRKDGHNWK KKKDGKTIKE AHEHLKVGNV ERIHVYYAHG  120
LDNTTFVRRC YWLLDKTLEH IVLVHYRETQ EVNFSTMHLQ LQSSPSMSMN SNSGSVSDPS  180
TPCLLSEELD SRDNHGYSVD ENELSEPRDT TTAMNHEQRL HEINTLEWDE LLVTDEPFKP  240
SMPKGDRFSY FDQRSQVPTN VTNNLLGNTP LFNNPVESIG SAYMPLSSGQ TNLNVESKES  300
IPITSLDNLL NDGLLQSQDS FGRWINEVIT ESPDTVIDPA IEPSISSIHN SFTDPTLNHC  360
QSSVMEQIFN ITDISPAWAF STEKTKILIT GYFHNEYLHL ANSNILVVCG NASVNAELIQ  420
PGVYRCVVQP HSTGLVNLFV SLDGHKPISQ VLNFEYRAPL SREPVVASEQ IQKWEEFQVQ  480
MRLAHLLFST SRSLSIMSTK LSPTSLNEAR KFAVKTSDIS DSWIYLLNSI KENNTPFPQA  540
RDGVLEIILK SRLREWLIER VAEGSKKSTD FDIKGQGVIH LCAILGYTWA IHLFSWSGLS  600
INFRDKFGWT ALHWAAYYGR EKMVAVLLSV GAKPNLVTDP SSKNPLGYIA ADLASMNGYD  660
GLAAYLSEKA LVSQFNDMSL AGNVRGSLET STITDATNLD SISEEQMYMK ETLAAYRTAA  720
DAAARIQTAF RENSLKQRTR AIEFSTPEDE ARGIVAAMKI QHAYRNFESR KRMAAAARIQ  780
YRFRTWKIRK EFLNMRRHAI RIQAAFRGFQ MRRQYRKILW SVGVIDKAIL RWRLKRKGFR  840
GLQVAPAEVT EQQEIGIEED FYHVSQKQAE ERVEKAVVRV QALFRSKKAQ EEYRRMKLTY  900
DEAALEYEEL SHPDMNLSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein