PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023000011.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 298aa    MW: 34446.4 Da    PI: 6.2546
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023000011.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox573.3e-18102154456
                     -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     ++++t +q++ Le+ F+ ++++ +e++ ++A+++gL  rqV vWFqNrRa+ k
  XP_023000011.1 102 KRRLTLDQVRMLERTFNAESKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSK 154
                     568999*********************************************99 PP
2HD-ZIP_I/II117.29.2e-38101192293
     HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     kkrrl+ +qv++LE++F++e+kLe+erKv++a+e+gl+prqvavWFqnrRAR ktk++E dye+L ++yd+lk++ ++L k ++eL++e+++
  XP_023000011.1 101 KKRRLTLDQVRMLERTFNAESKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSKTKKIEIDYESLNAEYDKLKNDFDSLLKVNHELKAEVDQ 192
                     9**************************************************************************************99976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MSAISAHPSN VQHYHTNPHT IPHSRPPFSS FLQPRKPKAW VFQPHLRIQI APISPKMDSE  60
TTHFLPLPES LPSLWISDSC SSMEGEFSQP QAKADRNRGG KKRRLTLDQV RMLERTFNAE  120
SKLEHERKVQ IAEEIGLRPR QVAVWFQNRR ARSKTKKIEI DYESLNAEYD KLKNDFDSLL  180
KVNHELKAEV DQLRDKWAAT EKTNNPYEPV GALYKVEMGS SRQEQGSRSS SKSDVFYAES  240
PTRENQSRSG NFLRDEEEDD ELGYWGILED ELSADELMDS FNVMSSAAEY QSFCFWSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.15e-33HD-ZIP family protein