PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022999986.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 546aa MW: 60542 Da PI: 6.2805

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022999986.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.9	2e-07	429	477	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v G g+W+ I + Rt ++k++w+++l XP_022999986.1 429 AWTLVEVIKLVEGVSICGAGRWSEIKKLSFssySYRTSVDLKDKWRNLL 477 7*************************9999999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 546 aa Download sequence
MEVEDLLEDD KSEKVEDAGQ ILECVPTEGT LFGKPRVKIS NGLPQSEGDA GYTARLEYIE 60 EVLQKVKREE RLRLACGSLN YPSAYVDGDR KGSDQHGRLP VTDEKFQSQI SLQEISHCSP 120 SLNENHENEH GSLGNFLKHP DKSVESESSD AICTTSKPDF SMLKGDICLD NLSIRELHEC 180 FKATFGRDTT VKDKSWLKRR IAMGLTNSCD IPASSFIIKE GKFIEESSQN VVGVSTIPTA 240 EALNIECSGS PTTYCLETKD HHHIEEIELD HGIEDQHEER AAVKRIRKPT RRYIEELSEV 300 ESREYVPKVI SLNKSSVSDG VSANSIERPS KKVCSDRGRT VITRLDSLGG SGVQVPCVSR 360 VRRSRPRKDI VALVFTLPDK DQNPSVKDTN EVEEKNLEEK PTDSGNASDD NAIIVPTPKS 420 GSRRKHHRAW TLVEVIKLVE GVSICGAGRW SEIKKLSFSS YSYRTSVDLK DKWRNLLKAS 480 FAQTPVGEGM SSRKHVSVSI PEQILLQVRE LAEMHAQIPP SNHGQGKLGG VSSGSNMHEI 540 SPAVCL

Sequence ? help Back to Top

Protein Sequence Length: 546 aa Download sequence

MEVEDLLEDD KSEKVEDAGQ ILECVPTEGT LFGKPRVKIS NGLPQSEGDA GYTARLEYIE  60
EVLQKVKREE RLRLACGSLN YPSAYVDGDR KGSDQHGRLP VTDEKFQSQI SLQEISHCSP  120
SLNENHENEH GSLGNFLKHP DKSVESESSD AICTTSKPDF SMLKGDICLD NLSIRELHEC  180
FKATFGRDTT VKDKSWLKRR IAMGLTNSCD IPASSFIIKE GKFIEESSQN VVGVSTIPTA  240
EALNIECSGS PTTYCLETKD HHHIEEIELD HGIEDQHEER AAVKRIRKPT RRYIEELSEV  300
ESREYVPKVI SLNKSSVSDG VSANSIERPS KKVCSDRGRT VITRLDSLGG SGVQVPCVSR  360
VRRSRPRKDI VALVFTLPDK DQNPSVKDTN EVEEKNLEEK PTDSGNASDD NAIIVPTPKS  420
GSRRKHHRAW TLVEVIKLVE GVSICGAGRW SEIKKLSFSS YSYRTSVDLK DKWRNLLKAS  480
FAQTPVGEGM SSRKHVSVSI PEQILLQVRE LAEMHAQIPP SNHGQGKLGG VSSGSNMHEI  540
SPAVCL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	362	368	RRSRPRK
2	362	369	RRSRPRKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	3e-92	MYB_related family protein