PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022999985.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 563aa MW: 62375 Da PI: 5.9818

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022999985.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.9	2e-07	446	494	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v G g+W+ I + Rt ++k++w+++l XP_022999985.1 446 AWTLVEVIKLVEGVSICGAGRWSEIKKLSFssySYRTSVDLKDKWRNLL 494 7*************************9999999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 563 aa Download sequence
MKVDGDGRFV PATDDEVMEV EDLLEDDKSE KVEDAGQILE CVPTEGTLFG KPRVKISNGL 60 PQSEGDAGYT ARLEYIEEVL QKVKREERLR LACGSLNYPS AYVDGDRKGS DQHGRLPVTD 120 EKFQSQISLQ EISHCSPSLN ENHENEHGSL GNFLKHPDKS VESESSDAIC TTSKPDFSML 180 KGDICLDNLS IRELHECFKA TFGRDTTVKD KSWLKRRIAM GLTNSCDIPA SSFIIKEGKF 240 IEESSQNVVG VSTIPTAEAL NIECSGSPTT YCLETKDHHH IEEIELDHGI EDQHEERAAV 300 KRIRKPTRRY IEELSEVESR EYVPKVISLN KSSVSDGVSA NSIERPSKKV CSDRGRTVIT 360 RLDSLGGSGV QVPCVSRVRR SRPRKDIVAL VFTLPDKDQN PSVKDTNEVE EKNLEEKPTD 420 SGNASDDNAI IVPTPKSGSR RKHHRAWTLV EVIKLVEGVS ICGAGRWSEI KKLSFSSYSY 480 RTSVDLKDKW RNLLKASFAQ TPVGEGMSSR KHVSVSIPEQ ILLQVRELAE MHAQIPPSNH 540 GQGKLGGVSS GSNMHEISPA VCL

Sequence ? help Back to Top

Protein Sequence Length: 563 aa Download sequence

MKVDGDGRFV PATDDEVMEV EDLLEDDKSE KVEDAGQILE CVPTEGTLFG KPRVKISNGL  60
PQSEGDAGYT ARLEYIEEVL QKVKREERLR LACGSLNYPS AYVDGDRKGS DQHGRLPVTD  120
EKFQSQISLQ EISHCSPSLN ENHENEHGSL GNFLKHPDKS VESESSDAIC TTSKPDFSML  180
KGDICLDNLS IRELHECFKA TFGRDTTVKD KSWLKRRIAM GLTNSCDIPA SSFIIKEGKF  240
IEESSQNVVG VSTIPTAEAL NIECSGSPTT YCLETKDHHH IEEIELDHGI EDQHEERAAV  300
KRIRKPTRRY IEELSEVESR EYVPKVISLN KSSVSDGVSA NSIERPSKKV CSDRGRTVIT  360
RLDSLGGSGV QVPCVSRVRR SRPRKDIVAL VFTLPDKDQN PSVKDTNEVE EKNLEEKPTD  420
SGNASDDNAI IVPTPKSGSR RKHHRAWTLV EVIKLVEGVS ICGAGRWSEI KKLSFSSYSY  480
RTSVDLKDKW RNLLKASFAQ TPVGEGMSSR KHVSVSIPEQ ILLQVRELAE MHAQIPPSNH  540
GQGKLGGVSS GSNMHEISPA VCL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	379	385	RRSRPRK
2	379	386	RRSRPRKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	4e-92	MYB_related family protein