PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022999814.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | HD-ZIP | ||||||||
Protein Properties | Length: 839aa MW: 90361.7 Da PI: 5.9139 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 64.5 | 1.5e-20 | 133 | 188 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +++t++q++eLe++F+++++p++++r eL+++l L++rqVk+WFqNrR+++k XP_022999814.1 133 KKRYHRHTPQQIQELESVFKECPHPDEKQRLELSRRLCLETRQVKFWFQNRRTQMK 188 688999***********************************************999 PP | |||||||
2 | START | 209.2 | 1.6e-65 | 341 | 566 | 1 | 206 |
HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS START 1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 ela++a++elvk+a+ +e +W s e++n++e++++f++ + + +ea+r++g+v+ ++ lve+l+d + +W e+++ + +t+ XP_022999814.1 341 ELALAAMDELVKMAQTDESLWIGSLeggrEILNQEEYMRTFTPCIGmkpngFVTEASRETGMVIINSLALVETLMDAN-RWAEMFPcmiaRTTTT 434 5899**************************************9988999*9***************************.**************** PP EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--..-TTSEE-EESSEEEEEEEECTCEEEEEEEE- CS START 83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe.sssvvRaellpSgiliepksnghskvtwveh 169 +vissg galqlm aelq+lsplvp R++ f+R+++q+ +g+w++vd Svd ++ p+ ss++ +++lpSg+++++++ng+skvtwveh XP_022999814.1 435 DVISSGmggtrnGALQLMHAELQVLSPLVPvREVNFLRFCKQHAEGVWAVVDLSVDAMRETPTsGSSFINCRRLPSGCVVQDMPNGYSKVTWVEH 529 ************************************************************9999******************************* PP EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 170 vdlkgrlphwllrslvksglaegaktwvatlqrqcek 206 ++++++++h+l+r+l++sg+ +ga++wva lqrqce+ XP_022999814.1 530 AEYDDSQVHQLYRPLLSSGMGFGAQRWVAILQRQCEC 566 ***********************************96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 839 aa Download sequence |
MSFGGFLDGG GGGSGGARIV ADLSYVNNNT TASNNNPTGG IPGGGIMPSG AVAPPRLITQ 60 SLTKSMFNSP GLSLALTNLD GGQGDLAARL PEGFEHNVGR RGRDEEHESR SGSDNMDGGS 120 GDDQDAADNP PRKKRYHRHT PQQIQELESV FKECPHPDEK QRLELSRRLC LETRQVKFWF 180 QNRRTQMKTQ LERHENTLLR QENDKLRAEN MSIRDAMRNP ICSNCGGPAI IGEISLEEQQ 240 LRIENARLKD ELDRVCTLAG KFLGRPISSL ANSIAPPLPS SSLELGVGSN GFGSLTMATS 300 MPIGPDFGGG LSGNLSVVQP PVRPTPGMGL DRSVERSMLL ELALAAMDEL VKMAQTDESL 360 WIGSLEGGRE ILNQEEYMRT FTPCIGMKPN GFVTEASRET GMVIINSLAL VETLMDANRW 420 AEMFPCMIAR TTTTDVISSG MGGTRNGALQ LMHAELQVLS PLVPVREVNF LRFCKQHAEG 480 VWAVVDLSVD AMRETPTSGS SFINCRRLPS GCVVQDMPNG YSKVTWVEHA EYDDSQVHQL 540 YRPLLSSGMG FGAQRWVAIL QRQCECLAIL MSSAVPVRDH TAITAGGRRS MLKLAQRMTA 600 NFCAGVCAST VHKWNKLNAG SVDEDVRVMT RKSVDDPGEP PGIVLSAATS VWLPLSPQRL 660 FDFLRDERLR SEWDILSNGG PMQEMAHIAK GQDHGNCVSL LRASAMNANQ SSMLILQETC 720 IDAAGSLVVY APVDIPAMHV VMNGGDSAYV ALLPSGFAIV PDGAVSRGLT TTNGSSPSGG 780 DGPQSQRVTG GGGSLLTVAF QILVNSLPTA KLTVESVETV NNLISCTVQK IKAALQCET |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G00730.1 | 0.0 | HD-ZIP family protein |