PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022999792.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 325aa MW: 36986.9 Da PI: 4.5668 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.3 | 1.3e-18 | 56 | 109 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe ++++ e++ +LA++lgL+ rqV vWFqNrRa++k XP_022999792.1 56 KKRRLSVEQVKALEKNFEVENKLEPERKVKLARELGLQSRQVAVWFQNRRARWK 109 56689************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 122 | 2.9e-39 | 55 | 147 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrls eqvk+LE++Fe e+kLeperKv+lareLglq rqvavWFqnrRAR+ktkqlE+dy +Lk++y++lk e+L++++++L +e++e XP_022999792.1 55 EKKRRLSVEQVKALEKNFEVENKLEPERKVKLARELGLQSRQVAVWFQNRRARWKTKQLERDYGVLKTNYQNLKLTYETLQHDNQALLKEIQE 147 69*************************************************************************************999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 325 aa Download sequence |
MKRPADSMGA LMSISPTADQ EQSPRNNGVN GTEFQSMLDG FGEEGYVEEL GHVSEKKRRL 60 SVEQVKALEK NFEVENKLEP ERKVKLAREL GLQSRQVAVW FQNRRARWKT KQLERDYGVL 120 KTNYQNLKLT YETLQHDNQA LLKEIQELKK KLQEDNSQSN LSVEEEMTVP ADSENALIEQ 180 MKPEITDQFS VPLATESQDF NYESLHNNGG EGEEVSLFPD FKDGSSDSDS SAILNEDYGP 240 TVAISSSVVL QHNHQHFMTG AASPSPSPDV KLNCATTALN YLQYQKGYQQ QTQMFPKMEE 300 HNFFSGEETC NFFSDEQAPT LHWWS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 56 | 85 | KKRRLSVEQVKALEKNFEVENKLEPERKVK |
2 | 104 | 112 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22430.1 | 6e-54 | HD-ZIP family protein |