PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022999757.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 234aa MW: 26765.2 Da PI: 8.8913 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.4 | 3.8e-19 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l+++++++G g+W+t+++ g+ R++k+c++rw +yl XP_022999757.1 14 KGLWSPEEDEKLLNYITKHGHGCWSTVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 47.6 | 3.7e-15 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E++l+v+++ lG++ W+ Ia+ ++ gRt++++k+ w++ XP_022999757.1 67 RGPFSQQEEDLIVELHSILGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 89********************.*********.*********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MGRHSCCFKQ KLRKGLWSPE EDEKLLNYIT KHGHGCWSTV PKLAGLQRCG KSCRLRWINY 60 LRPNLKRGPF SQQEEDLIVE LHSILGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLKQKG 120 IDPNTHKPYL DEETNNNGKN NSLIITSNDQ KSHEKASPIQ SPDMSTTTFE AFSNLFSPAL 180 NSCAVAPSST SQVVHNSNNN GFLWQPDEFL SAPSELMRSD WHRHPTLQPE LFWI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G57560.1 | 7e-87 | MYB family protein |