PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022999747.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Whirly
Protein Properties Length: 272aa    MW: 30486.8 Da    PI: 9.7533
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022999747.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly206.92.4e-64942311138
          Whirly   1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalk 95 
                     s+yk+kaal+v+++ p+f+ ldsg++k++r+G++ll++a+a+++r+ydW++kq+f+ls+te+++lv l+++esce+fhdp +++s+eGkvrk lk
  XP_022999747.1  94 SIYKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCELFHDPYKGKSDEGKVRKILK 188
                     7********************************************************************************************** PP

          Whirly  96 vePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsll 138
                     vePlpdGsG f+nlsv+n+l++++es+++P++kae++vl +++
  XP_022999747.1 189 VEPLPDGSGRFFNLSVQNNLTNVDESIYIPITKAEYTVLVEAF 231
                     ***************************************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MLRLQCLSSS LLLPLIPELS PETSSNRRLC RLNSFRPLLT FTTAPKFSPK CQYSWNTQQH  60
QAAFESGSPT GSFPSQTRAG AAAALPPRFF VGHSIYKGKA ALTVEPRPPE FTPLDSGAFK  120
ISREGFVLLQ FAPAAGVRQY DWSRKQVFSL SVTELGSLVA LGPRESCELF HDPYKGKSDE  180
GKVRKILKVE PLPDGSGRFF NLSVQNNLTN VDESIYIPIT KAEYTVLVEA FKFILPHLMG  240
WHAIANSMTR TEDNRRANEA NPRYGRDFEW SR