PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022999477.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 488aa MW: 54849.3 Da PI: 7.441

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022999477.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	111	1.4e-34	97	242	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra....... 77 lp+G++F+Ptd+el+ +L++kve+k+ + +e+i+++d i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ XP_022999477.1 97 LPAGVKFDPTDQELI-GHLEAKVEAKNdikshplI--DEFIPTLDgedgICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKiqtecdi 187 799**********.89**99987775332..234555545556******.555666799**************75666665 PP NAM 78 ...tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_022999477.1 188 qggGGETRWHKTGKTRPVMV-NGRQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 242 54433778********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MPIDENLQFQ VDIKLERGKE KERKIVKHLS RRTIQRRQKN DVEYEELLES MNMKSNLGSI 60 TSSDLIDAKL EEHQKCGSKQ CPGCGHKLEV KSEWLGLPAG VKFDPTDQEL IGHLEAKVEA 120 KNDIKSHPLI DEFIPTLDGE DGICYTHPEK LPGVTRDGLS RHFFHRPSKA YTTGTRKRRK 180 IQTECDIQGG GGETRWHKTG KTRPVMVNGR QKGCKKILVL YTNFGKNRKP EKTNWVMHQY 240 HLGQHEEERE GELVVSKIFY QTQPRQCNWS SSDKAAASAE VTGDNVVLSK RENVSGSYSP 300 SRQMATRQRD DISPVGGGGG GLCPPPHFAA TYGGLDHIQP FKADHFSFGP FRRTFDEAGI 360 GEAAPGEGIG DHRHHHDHHL SMATTAFQTT RPSNPISTII CPSSLHHSSI ILDHDSYRVS 420 QNESFQQQQH QHHNKLGGRS ASGLEELIMG CSSSKIKEES TMGNNSEEAA EWMKFSPFWP 480 EPDNPNHD

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MPIDENLQFQ VDIKLERGKE KERKIVKHLS RRTIQRRQKN DVEYEELLES MNMKSNLGSI  60
TSSDLIDAKL EEHQKCGSKQ CPGCGHKLEV KSEWLGLPAG VKFDPTDQEL IGHLEAKVEA  120
KNDIKSHPLI DEFIPTLDGE DGICYTHPEK LPGVTRDGLS RHFFHRPSKA YTTGTRKRRK  180
IQTECDIQGG GGETRWHKTG KTRPVMVNGR QKGCKKILVL YTNFGKNRKP EKTNWVMHQY  240
HLGQHEEERE GELVVSKIFY QTQPRQCNWS SSDKAAASAE VTGDNVVLSK RENVSGSYSP  300
SRQMATRQRD DISPVGGGGG GLCPPPHFAA TYGGLDHIQP FKADHFSFGP FRRTFDEAGI  360
GEAAPGEGIG DHRHHHDHHL SMATTAFQTT RPSNPISTII CPSSLHHSSI ILDHDSYRVS  420
QNESFQQQQH QHHNKLGGRS ASGLEELIMG CSSSKIKEES TMGNNSEEAA EWMKFSPFWP  480
EPDNPNHD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-138	NAC family protein