PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022999216.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YA
Protein Properties Length: 333aa    MW: 37088.5 Da    PI: 8.5795
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022999216.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA1025.7e-32194250158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     d p+YVNaKQy++Il+RRq+Rakle+++++ +++rkpylheSRh hAl+R RgsgGrF
  XP_022999216.1 194 DGPIYVNAKQYHGILRRRQSRAKLESQNRV-IRNRKPYLHESRHLHALNRVRGSGGRF 250
                     57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MNMMAIPLKN FSQKNLDQDS VHSVFPFSVD CTPWRNSNER KIPLPLSDNT TLKLETPPQH  60
HHKHLGFQLP DQESSTAHSI GQSLHKVCTM EVQNAQEQCI SSESGQEENC GESVENQMKP  120
VILFSNPEFM FSTPQVDGSQ PMTRVSYPYI DPYYGGLLCS AYTQQAINNQ AQVNTNVVGM  180
APARVPIPHA LAEDGPIYVN AKQYHGILRR RQSRAKLESQ NRVIRNRKPY LHESRHLHAL  240
NRVRGSGGRF LSSKKNQSPV QSTPSTTLSQ QMNTPDFNTC SSETSDRGMS SEITSISNGS  300
VRFGRSDSQL SALSSRMGGS MEQYSGDLMR GGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.12e-48NF-YA family protein