PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022999213.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YA
Protein Properties Length: 434aa    MW: 49212.6 Da    PI: 8.8378
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022999213.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.48.5e-32295351158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     d p+YVNaKQy++Il+RRq+Rakle+++++ +++rkpylheSRh hAl+R RgsgGrF
  XP_022999213.1 295 DGPIYVNAKQYHGILRRRQSRAKLESQNRV-IRNRKPYLHESRHLHALNRVRGSGGRF 351
                     57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 434 aa     Download sequence    
MFCAYMNYFL WSIWFIKLKS WIECPFELLY FYTRANSVAL FPCCDSHRRR TQKSVRLQSF  60
SFYQVAFVWV FSAQETCPTT SRHLPSLLLP SFSPNRFVEL LMNMMAIPLK NFSQKNLDQD  120
SVHSVFPFSV DCTPWRNSNE RKIPLPLSDN TTLKLETPPQ HHHKHLGFQL PDQESSTAHS  180
IGQSLHKVCT MEVQNAQEQC ISSESGQEEN CGESVENQMK PVILFSNPEF MFSTPQVDGS  240
QPMTRVSYPY IDPYYGGLLC SAYTQQAINN QAQVNTNVVG MAPARVPIPH ALAEDGPIYV  300
NAKQYHGILR RRQSRAKLES QNRVIRNRKP YLHESRHLHA LNRVRGSGGR FLSSKKNQSP  360
VQSTPSTTLS QQMNTPDFNT CSSETSDRGM SSEITSISNG SVRFGRSDSQ LSALSSRMGG  420
SMEQYSGDLM RGGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.14e-47NF-YA family protein