PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022999193.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 410aa MW: 45548.3 Da PI: 9.2186 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.8 | 4.8e-17 | 135 | 184 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_022999193.1 135 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 184 78*******************......55************************997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 410 aa Download sequence |
MMMLNLNDSI MNRDEATTDR IVMEDSETSN SSVVNADEVC NSRDEESSVL IFDILKKESP 60 GGVGGGPVPE LVTQALFPVA SGWGDSGSPV LRTQWLNLSP TANSGGGGGQ QELKAVQPKQ 120 QQVRKSRRGP RSRSSQYRGV TFYRRTGRWE SHIWDCGKQV YLGGFDTAHA AARAYDRAAI 180 KFRGVDADIN FNISDYDEDM KQTKNLNKEE FVHVLRRQSS GISRGGSKLR GLSVQKYGRW 240 ETQMNQIIGK NGTEERSERF ETTVEASNGG NGHNLDLSIG GIFNYHFSNS SQKLERPKNE 300 NNGHAHGMGG QQPNTPPSVF SCFYSAFLPL NQERGRETRN KESTSWRWQT ARSIEGNVKE 360 EKKKKIESHG SKSAASSGFS PSYNFGSFYA QNNTPLHTNH CLPTPYTNIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G28550.2 | 7e-52 | AP2 family protein |