PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022998872.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB_related | ||||||||
Protein Properties | Length: 519aa MW: 57969.1 Da PI: 7.4185 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24.5 | 6.3e-08 | 397 | 445 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v ++G g+W+ I r +Rt ++k++w+++l XP_022998872.1 397 SWTLSEVMKLVEGVSEYGVGRWTEIKRLQFsssSHRTSVDLKDKWRNLL 445 5************************876558999*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 519 aa Download sequence |
MNAASKETMM TSNQATKMFT YEFPDVDSDL SIFPAPEDDV LGVEHFLQPD YNKCFPGSVL 60 DFNTFHSHKC LSIENFSFAV EFDQIKIDSE SLHSSLTLEG ERTKQEVRDE KSKGTDDVVC 120 SGINKLSGTV NRQITDDIFN LAPGSCNASF LGNVDFGYPQ GFCTTDLGVD LSFAGVAGHN 180 VAFDQKDGKL MISSSTGSSG CSGSSTACLN DENMSDDRPV KRKRLSSCDS SKLNSEHNES 240 KIVPFNEGNK VETPVTEKRL RKPPRRYSEE SIEQKSRSNF KKSALKASKD KSLPSVCHTH 300 QWQKKLKAAP IVPKDKSFNG GCIQVPFGLP IEEGHSTKKR ICWEPEEIKD NRILCIKDKN 360 DVESFSAESE DENTEDECVT KGNTTQKGNS RRKHHISWTL SEVMKLVEGV SEYGVGRWTE 420 IKRLQFSSSS HRTSVDLKDK WRNLLKASDT QLQNRRKVVL GRKQALQQVP ESVLCRVREL 480 AAIYPYPREN KSKETCSAPT TSSFKSTTSN MLVCLPTVM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72650.2 | 3e-29 | MYB_related family protein |