PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022998871.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB_related | ||||||||
Protein Properties | Length: 544aa MW: 60750.3 Da PI: 7.5765 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24.4 | 6.7e-08 | 422 | 470 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v ++G g+W+ I r +Rt ++k++w+++l XP_022998871.1 422 SWTLSEVMKLVEGVSEYGVGRWTEIKRLQFsssSHRTSVDLKDKWRNLL 470 5************************876558999*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 544 aa Download sequence |
MNAASKETMM TSNQATKMFT YEFPDVDSDL SIFPAPEDDV LGVEHFLQPD YNKCFPGSVL 60 DFNTFHSHKC LSIENFSFAV EFDQIKIDSE SLHSSLTLEG ERTKQEVRDE KSKGTDDVVC 120 SGINKLSGTV NRQITDDIFN LAPGSCNASF LGNVDFGYPQ GFCTTDLGVD LSFAGGLGPK 180 PLCDWNSPFI RDIQLKNSLS VAGHNVAFDQ KDGKLMISSS TGSSGCSGSS TACLNDENMS 240 DDRPVKRKRL SSCDSSKLNS EHNESKIVPF NEGNKVETPV TEKRLRKPPR RYSEESIEQK 300 SRSNFKKSAL KASKDKSLPS VCHTHQWQKK LKAAPIVPKD KSFNGGCIQV PFGLPIEEGH 360 STKKRICWEP EEIKDNRILC IKDKNDVESF SAESEDENTE DECVTKGNTT QKGNSRRKHH 420 ISWTLSEVMK LVEGVSEYGV GRWTEIKRLQ FSSSSHRTSV DLKDKWRNLL KASDTQLQNR 480 RKVVLGRKQA LQQVPESVLC RVRELAAIYP YPRENKSKET CSAPTTSSFK STTSNMLVCL 540 PTVM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72650.1 | 4e-29 | MYB_related family protein |