PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022998687.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | AP2 | ||||||||
Protein Properties | Length: 518aa MW: 58155.9 Da PI: 5.9908 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48.2 | 2.8e-15 | 194 | 253 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022998687.1 194 SQFRGVTRHRWTGRYEAHLWDnSCRkEGqtRKgRQVYLGGYDKEEKAARAYDLAALKYWG 253 789******************655454478446*************************98 PP | |||||||
2 | AP2 | 46.6 | 8.3e-15 | 298 | 347 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022998687.1 298 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 347 9***************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 518 aa Download sequence |
MSNWLGFSLT PHLKIHDATS ADDQHPNPSS FPPLMPLRSD GSLCIAAAHD WRSYENEMGA 60 RNEEESPKLE DFLGNCYSNS PPNDQAHDNN NNFIQANTNN NYHYHPDHHS LISNNSNAIY 120 KSWLGPTTSS PQNECGFRSL SLGMSPNSHN DTVSLPSPPH MAVDSRKRPM PVGKPPVKEP 180 VPRKSIDTFG QRTSQFRGVT RHRWTGRYEA HLWDNSCRKE GQTRKGRQVY LGGYDKEEKA 240 ARAYDLAALK YWGPTTHINF SLSTYENELE EMKNMTRQEF VANLRRKSSG FSRGASMYRG 300 VTRHHQHGRW QARIGRVAGN KDLYLGTFST QEEAAEAYDI AAIKFRGTSA VTNFDISRYD 360 VKRICSSSTL IASDLAKRSP LKDGIPSTAE EYSACASPTS SQPLLGITEN GDVESQHELV 420 EMVWCDNGGK DDDNQQEENV AKMNDDVSLM GSRNETEASK CCMVQNNGEF GVGGGEYSQG 480 YYSMEEGKYE DGRDENREEE NDVALAHHQV PMFALWNE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72570.1 | 1e-126 | AP2 family protein |