PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022998644.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 320aa    MW: 36260.1 Da    PI: 5.4924
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022998644.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM159.61.2e-49171451127
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     + pGfrFhPtdeelv +yLk k+++++l + e i+++diyk++PwdLpk ++++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++v+s+
  XP_022998644.1  17 MLPGFRFHPTDEELVGFYLKMKIQQRPLCI-ELIRQLDIYKYDPWDLPKLAASGEKEWYFYCQRDRKYRNSARPNRVTGAGFWKATGTDRPVYSS 110
                     579************************999.89***************8888899***************************************9 PP

             NAM  96 ...kgelvglkktLvfykgrapkgektdWvmheyr 127
                        +++ +glkk+Lvfykgra k+ ktdW+mhe+r
  XP_022998644.1 111 ncsSKSIIGLKKSLVFYKGRACKALKTDWMMHEFR 145
                     8877778***************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MEERNNEELV LEDDDVMLPG FRFHPTDEEL VGFYLKMKIQ QRPLCIELIR QLDIYKYDPW  60
DLPKLAASGE KEWYFYCQRD RKYRNSARPN RVTGAGFWKA TGTDRPVYSS NCSSKSIIGL  120
KKSLVFYKGR ACKALKTDWM MHEFRDPSNI MDSWAICRIF KKTNVSRRGV SSTSKHEITY  180
EPEVNRNGSV LCSKTVEDVL CNVSNDYLEG KLPQLSIPNE PIGGPSSFTA QPMGVSDIDV  240
SSLLLNMSAS FVGDFACRAP ETSEPFSWFQ SVGQPNGLAE QPMYGQDNAL LFEDSKPWES  300
APPSSSIGHA LSCIWDKLLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26870.12e-78NAC family protein